Vibrio parahaemolyticus RIMD 2210633: VP0003
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Entry
VP0003 CDS
T00120
Name
(GenBank) inner membrane protein, 60 kDa
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02024
Quorum sensing
vpa03060
Protein export
vpa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VP0003
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VP0003
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VP0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpa03029
]
VP0003
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpa02044
]
VP0003
Mitochondrial biogenesis [BR:
vpa03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
VP0003
Secretion system [BR:
vpa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VP0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
DUF2427
Motif
Other DBs
NCBI-ProteinID:
BAC58266
UniProt:
Q87TR5
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Position
1:complement(2389..4011)
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AA seq
540 aa
AA seq
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MDSQRNILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSSLPAPSFADELDPVPGQQQ
ASAKTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLLKDTQGHQFIAQSGLV
GPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRGSYALNVE
YDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNL
SINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNKTIATGDQAKF
EATLWVGPKLQQEMAAVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTF
IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGC
LPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFLIQKMSP
TTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKKGLHTK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaacgtaatatcctgctcatcgctctggcactggtttctttcttgctattt
caacaatggcaagtcgcaaagaatccagcacctcaagcggttgaacaggctcaatcaagc
agcagtctacctgcaccatcttttgctgatgagctggacccagttcctggtcaacagcaa
gcttctgcaaaaactatcacagtaacgactgatgttttaactctgtcgatcgacaccgtt
ggtggcgatgtggtacatgccgacttaaaccaatactctgctgaacttgattcatcagac
ccattcgttctgctaaaagacacacaaggtcatcaattcatcgcccaaagcggtcttgtt
ggtcctcaaggtatcgatctaagcagctctaaccgtcctcactacaatgtgagcgcagac
agcttcactctagctgacggtcaagacgaactacgcgttccgatgacatttactgcaaac
ggcatcgaatacacaaaaacttacgtattaaaacgcggcagctacgcgctgaacgttgaa
tacgatgtagcgaacaactctggtaacaacgcaaccttcggtatgtacgcacacctacgt
caaaacctaatggacgctggtggtagcatcacaatgccaacctaccgtggcggtgcttac
tcaactgaagatactcgttacaaaaaatacagctttgaagatatgcaggatcgtaacctg
tctatcaacctagcagatggccaaggttgggcagcaatgatccaacactacttcgcagct
gcttggatccctcgtaacgaaccaggaactaacctttacactcgcgtaattggcaaccta
ggcgatatcggcgtacgtatgccgaacaaaacgatcgcgacgggtgaccaagcgaagttt
gaagcaacactttgggttggtcctaagctacaacaagaaatggcagcagtggcaccaaac
ctagacctagtagtggactacggctggctatggttcatcgctaaaccacttcactcactg
cttgctttcatccaaagcttcgtcggtaactggggtgtggcaatcatctgtttgaccttc
atcgttcgtggtgcaatgtacccactaacgaaagcgcaatacacgtctatggcgaaaatg
cgcatgctacagcctaagctgcaagctatgcgtgagcgtattggcgacgaccgtcaacgc
atgagccaagagatgatggaactgtacaagaaagagaaagtaaacccactgggtggctgt
cttcctcttgttctacagatgcctatcttcatcgcactatactgggcgctaatggaatcg
gttgagcttcgtcactctccattcttcggttggattcatgacctttcagcgcaggaccct
tactacatcctgccactactgatgggtgcttcaatgttcctaatccagaagatgagccca
acaaccgtaacggatccaatgcagcagaagatcatgaccttcatgccggttatgtttacc
ttcttcttcttgttcttcccatcaggcctagttctgtactggttggtgtcgaacatcgtt
actctgatccagcaaaccttgatttacaaagcgctggagaaaaaaggcttacacactaag
taa
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