Vibrio parahaemolyticus RIMD 2210633: VP0020
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Entry
VP0020 CDS
T00120
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00500
Starch and sucrose metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VP0020
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VP0020
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF5640
Motif
Other DBs
NCBI-ProteinID:
BAC58283
UniProt:
Q87TP9
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All DBs
Position
1:complement(17066..19150)
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AA seq
694 aa
AA seq
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MKKTILALSIGLLGACSQIPENAIVLSVGDDTAVFEPNSDGLLVAEQKLEKGNYTFTIAD
SKQTCGNSFALAEESRIKFNTPLKMDNCATDTSMPLRIFKANTYLFTLNPDTNELTVKIK
PKQSQDITYSCPVATDTAKTINVAQTFTDGTVVRDALTGQEATVANGSVTMQPGPMSQGL
LLLEEVDQQAEKPFSWDNATVYFVMTDRFYNGNPDNDNSYGRSKDGKYEIATFHGGDLAG
LTKKLDYIESLGVNAIWITSPLEQIHGWVGGGDKGDFKHYGYHGYYHQDWTKLDANMGTE
DELRAFIDTAHKKGIRVVWDVVMNHTGYATLADMQEFGFGQLYLDDQEAKEVLGEKWTDW
QPKSGQSWHSFNDYIKYGDSEAWEKWWGKDWIRTDIGDYDAPGYNDITMSLNYLPDLKTE
STQKTGLPNFFRNKNTNAQDELKTPREHLITWLSDWVRDYGIDGFRVDTAKHVEMEAWAE
LKASTTQALAEWKQNHPDKALDDLPFWMTGEVWAHSVVKSPYFDNGFDSIINFEFQSDVA
PKALKCFAQLDNDYRRYAERINSDPEFNVLSYLSSHDTQLFWSARSRSFDDQARAANALM
LAPGAVQIYYGDEIARDFGVTGSDPTQGTRSDMPWDKIHGEREDLLQHWQKLGKFRQRHP
AVAQGKHITRNQEGYYAFERQYQDDKVLIVYTGE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaattctcgcactctctatcggcctactgggcgcctgcagccaaattcca
gaaaatgccatcgtattaagcgttggagacgatactgccgtcttcgaaccaaactcagac
ggtttactcgtcgcagagcaaaaactagaaaaaggcaactacacctttaccattgccgac
agcaaacaaacctgtggcaacagctttgcgctagcggaagaaagtcgcatcaaattcaat
acaccattaaaaatggataactgtgcaaccgacacatctatgccgctgcgcattttcaaa
gccaatacctacctcttcacgctcaatccagacaccaatgagctaaccgttaaaatcaaa
ccaaaacaaagtcaggacatcacctattcttgccctgttgcaaccgacacagctaaaacc
atcaacgtagcccaaacctttactgatggcactgttgttcgtgacgccttaaccgggcaa
gaagccaccgtcgccaatggcagcgtaaccatgcaaccaggcccgatgagccaaggtcta
ttactgttagaagaggttgatcagcaagccgaaaaacctttcagctgggacaacgcaacg
gtgtattttgtcatgactgaccgcttctataacggcaacccggacaacgacaacagctac
ggtcgcagcaaagacggaaaatacgagattgctaccttccatggtggtgacttagcgggt
ctgacgaaaaaactcgattacatcgaatccctcggtgtgaatgccatctggataacttca
ccactggaacaaatccacggctgggttggcggcggcgataaaggcgacttcaagcactac
ggctaccacggctactaccaccaagattggaccaagcttgatgccaacatgggtaccgaa
gatgagctgagagccttcatcgataccgcccacaagaaaggcatccgtgtagtctgggat
gtggtcatgaaccacactggctacgcaacattagccgacatgcaggaattcggctttggt
caactttaccttgatgaccaagaagccaaagaagtccttggtgaaaaatggaccgactgg
caaccaaaatcgggacaaagctggcacagcttcaacgactacatcaaatacggtgatagt
gaagcgtgggaaaaatggtggggcaaagattggattcgcaccgacattggcgattacgat
gcgccgggatacaacgacatcaccatgtctttgaactacctaccggatctcaaaaccgaa
tcgacgcagaaaaccggactaccaaacttcttccgcaataaaaacaccaatgcgcaagat
gagttgaaaaccccacgagaacatctgatcacatggctatcggattgggtacgtgattac
ggcattgatggcttccgcgtcgataccgccaaacacgttgagatggaagcgtgggcagag
ctcaaagcaagtaccactcaagccctcgccgaatggaaacaaaaccaccccgacaaagca
ctagacgatctgccattttggatgaccggcgaagtgtgggcacacagcgtagtgaagagc
ccgtatttcgataacggcttcgattcgatcatcaacttcgagttccaatctgacgtggca
ccaaaagcgctaaagtgtttcgctcaacttgataatgattaccgccgctatgcagagcgt
attaactccgatcctgaattcaacgtgttgagttacctgtcttcgcacgatactcaactg
ttttggtcggcacgcagccgcagctttgatgaccaagctcgcgccgccaatgcgttaatg
ctggcaccgggtgcagtacaaatctactacggcgatgagattgcccgtgactttggcgtg
actggatccgatccgacccaaggtacacgttccgacatgccatgggacaagattcatggc
gagcgtgaagacttactacaacattggcagaaattgggcaaattccgtcaacgccaccca
gcggttgctcaaggtaagcacatcactcgtaatcaagaaggctactacgcattcgaacgc
caataccaagacgacaaagtactgattgtttacactggcgaataa
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