Vibrio parahaemolyticus RIMD 2210633: VP0030
Help
Entry
VP0030 CDS
T00120
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00071
Fatty acid degradation
vpa00280
Valine, leucine and isoleucine degradation
vpa00310
Lysine degradation
vpa00362
Benzoate degradation
vpa00380
Tryptophan metabolism
vpa00410
beta-Alanine metabolism
vpa00640
Propanoate metabolism
vpa00650
Butanoate metabolism
vpa00907
Pinene, camphor and geraniol degradation
vpa00930
Caprolactam degradation
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
vpa01212
Fatty acid metabolism
Module
vpa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VP0030
00650 Butanoate metabolism
VP0030
09103 Lipid metabolism
00071 Fatty acid degradation
VP0030
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VP0030
00310 Lysine degradation
VP0030
00380 Tryptophan metabolism
VP0030
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VP0030
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VP0030
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VP0030
00930 Caprolactam degradation
VP0030
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VP0030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VP0030
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VP0030
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VP0030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
BAC58293
UniProt:
Q87TN9
LinkDB
All DBs
Position
1:complement(28083..30254)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQADTLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALTSHQGLKGLMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVETDALYESALQTLTSAINEKIDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQVAGPHYPAPMTAVITIEEGARFARNEALDIERKYFVKLAKSEEAKALVGLFLNDQYIK
GIAKKAAKSASKDTERAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLAQGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKATVLSEVESHVG
EDTVITSNTSTIPINLLAQSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKVDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDALFEANKYGQKNGNGFYSYTIDKKGK
PKKTFTEDILPVLADVCADKQEFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVEMAKQHADLGAMYHVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgacaccctacaggtaaaggaaatacaagatggcatagcagagctg
agcttctgctcccctaaatccgtaaacaagctcgacctagcaacgctagagtctctcgat
aaggctcttgatgcgttgacttcacatcaaggtctaaagggcttaatgctcacttcagat
aaagatgcgttcatcgttggcgcagacatcactgaattcttgggcctcttcgctaaaaca
gacgccgagctcgatcaatggctacaatttgccaatagcatcttcaataaactagaagac
ttacccgttccgacaatctcagtacttaaaggtcacacacttggcggcggctgcgaatgc
gtactggctaccgacatgcgtatcggtgataaaaccaccagcattggcctaccagaaacc
aaacttggcatcatgcctggctttggcggttgtgtgcgtttgccgcgtgttatcggtgca
gatagcgcgatggaaatcatcacgcaaggcaaagcatgtcgtgcagatgaagcattgaag
attggtttattggatgctgtggttgaaactgatgcgttgtatgaatccgcattgcaaaca
ctgacttcagctatcaacgaaaagatcgattggcaagcacgtcgtaaacaaaaaacctcg
ccactgacactcagcaagctagagtcgatgatgagcttcacgatggcaaaaggcctagtg
gcacaagtagccggtccacactaccctgcgccaatgacagccgttatcacgattgaagaa
ggcgcacgctttgcgcgtaacgaagcactcgacattgaacgcaaatacttcgttaaactc
gcgaaatcagaagaagccaaagctctggttggtctgttcctcaacgaccaatacatcaaa
ggcatcgcgaaaaaagcggcgaaatcagcaagcaaagacactgagcgagcagcggtatta
ggtgcaggcatcatgggtggtggcatcgcttaccaatctgcgctgaaaggcgtgccagta
ttgatgaaagacatcgcccaaccatctctcgatttaggcatgaccgaagcgtctaaactg
ctgaacaaacgccttgctcaaggtcgtatcgacggcttcaagatggcgggaattttggca
tcaattaccccaagcctacattacgcaggcatcgaaaactcagatgtgattgttgaagcc
gttgtcgaaaatccaaaagtaaaagcaacggtactgagcgaagtcgaatcgcacgttggt
gaagacaccgtcattacatcaaacacatcgacgattccaatcaacctattggcacaatca
cttaaacgcccagaaaatttctgtggtatgcacttctttaaccctgtgcatcgcatgcct
ttggttgaaatcatccgtggtgagaaaacttctgatgaaaccatcaaccgcgtagtggct
tacgcagcgaaaatgggtaaatccccaatcgtcgtgaacgactgtccgggattcttcgtc
aaccgcgtattattcccgtactttggcggtttcagcatgttgcttcgtgacggtgcagac
ttcactaaagtcgacaaagtcatggaacgcaaatttggctggccgatgggcccggcgtac
ttgcttgatgtagtcggcatcgatactgcgcaccacgcacaagcggtgatggcagaaggt
ttccctgagcgaatgggtaaacaaggtcgtgacgcgattgatgctctattcgaagccaac
aaatacggtcagaagaatggcaacggtttctatagctacaccattgataaaaaaggtaag
cctaagaaaaccttcactgaagatatcttgccagtactggcagacgtctgcgcggataaa
caagagttcgatgagcagaccatcatccaacgtatgatgattccgatgatcaacgaagtg
gtgctgtgtctgcaagaaggcattattgcaacgcctcaagaagcagatatggcgctggtt
tacggccttggtttccctccattccgcggcggtgtattccgctacctagacagcgtaggt
attgctgaatttgttgaaatggcaaaacagcacgctgatctaggcgcgatgtaccatgtt
ccgcaaatgttgattgatatggcggcgaaaggcgaaagcttctacggcgcgcaacagcaa
ggttctatctaa
DBGET
integrated database retrieval system
