KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0041
Entry
VP0041            CDS       T00120                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpa03400]
    VP0041
Enzymes [BR:vpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VP0041
DNA repair and recombination proteins [BR:vpa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VP0041
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII
Other DBs
NCBI-ProteinID: BAC58304
UniProt: Q87TM8
LinkDB
Position
1:47155..49170
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVGQTLGKAESKGLMVSTFHTLGLNIIKREYKQLGLKAGFSLFDDQDQMALLKEL
TEKQLDGDKDLLKQLLSTISNWKNDMLTPEQAKAMAKGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILLPVLLLRNNEDVRQRWQNRIRYLLVDEYQDTNTSQYELVKLIVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFEASFEMGLEQHLSGRGLENLRRFTQWLVAIADQAERGNTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEVNKKPVSQEERMAKGQA
HIANLRSMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaaccctagacaagatgaagccgtaaaatacgtgtctggtccatgcctagtg
cttgccggcgcaggctcaggtaaaacgcgcgtaattactaataaaattgcttacttggtt
cagcaatgtggttacaaagcaagaaacatcgcggccgtgacctttaccaacaaagccgcc
cgcgagatgaaagagcgtgttggtcaaaccttgggtaaagccgagtcgaaaggtttgatg
gtttctactttccatacattgggcttgaatatcatcaaacgtgagtacaagcagcttggt
ttaaaagcgggcttttcgttgtttgatgatcaagaccagatggcgctgttgaaagagttg
acggaaaagcaactcgacggtgataaagacctactcaaacaactattgagtacgatctcc
aactggaaaaacgacatgttaacgccagagcaagccaaagcgatggcgaaaggcgagcaa
caacagctattcgctttttgttttgagatgtaccagaagcagatgaaggcgtacaacgcg
ctcgattttgacgacctgatccttctgccagtattgctgctgcgtaataatgaagacgtg
cgtcagcgttggcaaaatcgcatccgctatctattggttgatgaataccaagacaccaac
accagtcagtatgaactggtcaaattgattgtgggcgagcgcggtcgcttgaccgtcgtg
ggtgatgatgaccaatcgatttattcgtggcgtggtgccaaaccgcaaaacttggtgctg
ctcgggcaagattacccgaacctgcgcctgatcaagctggagcagaactatcgctcgacc
agtcgaattcttcgtgctgcaaacattttgattgccaacaacccgcacgtatatgaaaaa
tcattgttctcagaaattcctgacggcgaaaaactgaaagtgttgctagccaagaacgaa
gagcacgaagcagaaagggtcacgggtgagttgattgcgcacaagttcttaaatcgcacg
gaatatcgagattatgcgattttgtatcgtggtaaccatcaatcgcgtttgattgaaaaa
tcactgatgcaaaaccgcgtaccttacaaactgtctggcggtacgtcgtttttcgcgcgt
gccgaaatcaaagacatcatggcgtatcttcgagtgttggtgaaccctgacgatgacaac
gcatttctgcgaattgtgaacacgccgcgacgcgaaattggcccggtaacgttagaaaaa
ttgggcagttacgccaatatgcgcggcaaaagcctatttgaagcaagctttgaaatggga
ttagagcaacacctatcgggacgtggtctcgaaaatctgcgtcgctttacacaatggttg
gtggcgatagccgatcaagctgagcgaggtaacacagtagaagctgttcgctccttggtt
cgtgacattcattacgaagattggctgtacgaaacctcagccagcccgaaagccgctgaa
atgcgcatgaagaacgtttcggatctctactcttggattgtggctgacttagaaggtgac
aattacgaccaagaagagaaaacgctgaaagaagtggttcaacgtttgaccttgcgtgac
atgatggaacgcggcgaagaagacgaagacagcgatgccgttcaattgatgacattacac
gcatcaaaaggtctagagtttccttacgtttatttgattggttcggaagagggcatattg
ccgcatcaaaccagtattgatgaagataacgtcgaagaagagcgacgcttgatgtacgta
ggcatcacccgcgcacagcgagagctgacgtttaccatgtgtaaagagcgtcgccagttt
ggtgagttgatcaagccgactcaaagtcgttttttggatgagctgccgtttgatgatgtc
gaatgggaagtgaacaaaaagcctgtgtctcaagaagaacgaatggcaaaaggtcaggcg
cacattgcaaacctgcgctcgatgtttaagaagtga

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