Vibrio parahaemolyticus RIMD 2210633: VP0062
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Entry
VP0062 CDS
T00120
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00030
Pentose phosphate pathway
vpa01100
Metabolic pathways
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
Module
vpa_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
VP0062
Enzymes [BR:
vpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
VP0062
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
FAD_SOX
zf-A20
Motif
Other DBs
NCBI-ProteinID:
BAC58325
UniProt:
Q87TK7
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Position
1:complement(69959..71755)
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AA seq
598 aa
AA seq
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MTHSVVLEVTQRLTERSREARAAFLARTEVQAEAGKGRVGLSCGNLAHAVAASCSSEKKN
ILDFTHANVALISAYNDMLSAHQPYQDYPAQIKQVLADYGHTAQVAGCVPAMCDGVTQGQ
AGMDMSLFSRDLIAQSTALSLSHNVFDATLLLGICDKIAPGQLMGALSYAHLPTAFVPAG
LMATGISNEEKVDVRQKYAAGEVGKDALLDMECRAYHSAGTCTFYGTANTNQLVFEAMGL
MLPGSAFIHPHTQLRKALTDHAALKIASMTAGSAHFRPLAEVVTEKSLVNGIIALLASGG
STNHTIHMIAVARAAGILLTWQDISDLSDVVPLLARVYPNGPADMNAFQDAGGVPALLHR
LNESELLHRDVKPVFGKFEDQMTLPSLVDGQLTWTPCQGSQDGDVIAKPDATFQNTGGTR
VLTGNLGKAVVKVSAVKEEQRVIVAPAIVFQCQHEVEAAYKRGELNKDCIVVVTHNGPAA
NGMPELHKLMPILGNVQKAGFKVALVTDGRLSGASGKIPSAIHVSPEAIRGGAIGLVRNG
DLIRLDCQTGELNNLSDTTGRELIHFDTESTQQTWGRGLFSVIRQNVSSAEEGASFIV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgactcactctgttgttcttgaggtcacacaacgtttgaccgagcgcagccgtgaagcg
cgcgctgcgtttctcgctcgcaccgaagtgcaagccgaagctggcaaaggccgtgttggt
ttatcttgtggtaacttagctcatgcagtcgccgcatcttgctcttctgaaaagaaaaat
attctcgattttactcatgccaatgtcgcgctgatcagcgcctacaacgacatgttgagc
gcccaccagccgtaccaagactacccagcgcaaatcaaacaagtgctggcggactacgga
catacagcgcaagtcgcaggttgtgtgccagcgatgtgcgatggggtaactcaaggtcaa
gcaggcatggatatgtcgctgttttcgcgtgacttaattgcgcaatcaacggcgttgtct
ttgagtcacaatgtctttgatgccacattactgcttggcatctgtgacaaaatcgccccg
gggcaactgatgggcgcgctgtcttacgcgcatctaccgactgcgtttgtaccagcgggt
ctgatggcaacgggcatcagcaacgaagagaaagtcgacgtgcgccaaaaatacgcagcg
ggagaagtcggcaaagacgctctgctggatatggagtgtcgggcttaccactctgcgggt
acatgcacgttttacggcaccgccaacaccaaccagttggtgttcgaagccatgggcttg
atgctgccaggttcggcattcattcatccccatacccaactgcgtaaagcgttaaccgat
cacgcggctctgaaaatcgcctcaatgacggcgggttctgcacacttccgtccgctggcc
gaggtagtcacagaaaagagcttggtcaacggcatcatcgctctacttgcatctggcggc
agcaccaatcacaccattcatatgatcgccgtggcgcgtgctgctggcatcttgctcacg
tggcaagacatcagcgatctgtcggatgtggttcctttgttagctcgcgtttacccgaac
ggcccagccgatatgaacgcgttccaagacgcgggtggcgtgccagcgttattgcaccgc
ttgaacgaatccgaacttttgcatcgcgatgtgaaacccgtgtttggtaaatttgaagac
caaatgacgctgccgagccttgtcgatggacaactgacttggacaccatgccaaggcagc
caagacggtgacgtgatcgccaaaccggacgccactttccaaaatactggcggcactcgc
gtattgactggcaacttgggcaaagccgtggtgaaagtgtctgcggtgaaagaagagcaa
cgcgtgattgttgcacctgcgatcgtattccaatgccaacacgaagtggaagccgcgtac
aaacgtggtgagctgaacaaagattgcatcgttgtagtcacacacaacggcccagcagca
aacggcatgcctgaactgcacaagctgatgccaattttaggtaacgtgcaaaaagcgggc
tttaaagtggcgttggttactgacggtcgtttatctggcgcgtcaggtaaaattccgtct
gcgattcatgtttctccagaagccattcgtggtggcgcgattggtttggtgcgcaacggt
gatttgattcgccttgattgccaaacgggcgaactgaacaacttaagcgataccactggt
cgcgagttgattcatttcgacaccgaatctacccaacaaacctggggacgaggcttgttt
agcgtgatccgccaaaacgtctctagcgcagaagaaggcgcaagcttcattgtgtaa
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