Vibrio parahaemolyticus RIMD 2210633: VP0115
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Entry
VP0115 CDS
T00120
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00860
Porphyrin metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01240
Biosynthesis of cofactors
Module
vpa_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VP0115
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
VP0115
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Motif
Pfam:
Radical_SAM
HemN_C
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
BAC58378
UniProt:
Q87TF4
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All DBs
Position
1:120797..122188
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AA seq
463 aa
AA seq
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MSNQHTESKQQIVWDQAVLDKYNYSGPRYTSYPTALEFHEAFTISDYDMACTQYPERPLS
LYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDLLEHEIRQRAALLVGRTVTQLHFGGGT
PTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLDHLRSEGFNRLSIGVQDF
NKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQTKASFAKTLEQVLEMQP
GRLSVFNYAHMPQLFAAQRKIKDEDLPKAEEKMAILQDTIATLTGAGYQFIGMDHFAMPD
DELAVAQREGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAYAQNQKELKKYYAQVNDLR
HALWKGVSLDSDDLLRREVIKQLICNFKLDKKAIESEFRVKFDQYFKEDLQLLQTFINDE
LVEVDDNEIRVTLRGRLLIRNICMSFDKYLRAKARQQQFSRVI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcaacacactgaatcgaaacagcaaattgtctgggatcaagcggtattggat
aagtacaactattccggtcctcgctacacgtcgtacccaacggcgctggagtttcatgaa
gcgtttaccatctcagactatgatatggcatgcactcagtacccagagcgtccgttatcg
ctgtacgtacacattccgttttgccataagctttgctactactgtggttgtaataaagtc
attacacgccactcgcacaaagcggatgaatacctcgacttgcttgaacacgaaattcgt
caacgtgctgcattgctcgttggtcgcaccgtgacgcaattgcattttggtggtggtaca
ccgacgtttctatctgaaaagcaaatcactcgcgtgatgaacttgctacgccaagaattt
acattcagtgatgatgcagaaatcagcattgaagtagacccgcgtgaaattcagatcacc
atgttggatcatcttcgtagtgaaggcttcaaccgcctgagcatcggcgttcaggacttc
aacaaagaagtgcaaaaactggttaaccgtgaacaagatgaagaattcatctttgcgatg
gtggcacgtgcgaaagagttgggtttccgttcgaccaacctcgatttgatctacggtttg
ccgaagcagaccaaagcatcttttgcgaagacgttagaacaagtgctggaaatgcagccg
ggtcgtctgtcggtctttaactacgcacacatgccgcaattgtttgctgcgcagcgtaag
attaaagacgaagatttgccaaaagcagaagagaaaatggcgattctccaagacacgatc
gcaactttgacgggggctggctaccagttcatcggcatggaccattttgcgatgcctgac
gacgaactcgccgttgcgcagcgcgaaggtgtgttgcatcgcaacttccaaggctacacc
actcaaggtgaatgtgacttggtgggctttggtgtttctgccatttcaatgattggtgat
gcgtacgcgcaaaaccaaaaagagctcaagaagtactacgctcaagtaaatgaccttcgc
cacgcattgtggaaaggtgtctcactcgattcggatgacttgctccgtcgtgaagtcatt
aagcagctgatttgtaactttaagcttgataaaaaagcgatcgaatctgaattcagagtg
aaatttgatcagtacttcaaagaagatctgcaattgctgcaaacgttcatcaatgatgag
ttggtggaagtggatgacaatgaaattcgagtaacactgcgtggtcgcctgcttattcgt
aacatctgtatgagcttcgataaatatctgcgagcaaaagcgcgtcagcagcaattctct
cgcgtgatttga
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