Vibrio parahaemolyticus RIMD 2210633: VP0211
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Entry
VP0211 CDS
T00120
Name
(GenBank) KDO transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00540
Lipopolysaccharide biosynthesis
vpa01100
Metabolic pathways
Module
vpa_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VP0211
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
VP0211
Enzymes [BR:
vpa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VP0211
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VP0211
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VP0211
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VP0211
Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
Lipid A
VP0211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
eIF-5_eIF-2B
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
BAC58474
UniProt:
Q87T59
LinkDB
All DBs
Position
1:complement(221223..222494)
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AA seq
423 aa
AA seq
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MLIRIIYTALLALASPFLLLGLYKSKPNKPKFGGRWKEHFGITPQLKTHQRPIWIHAVSV
GESIAATPLIKELKQQYPEQPIVVTTTTSTGAEQIAKLGDLVEHRYMPIDFGFAVKSFLK
AIQPKKMLIIETELWPNTLNVVKQANIPITVVNARLSEKSCQNYAKVQWLFNQLHPCLTQ
VLCQTDSDAERFERLGVNKEKLSVTGSIKFDIQISDHVKQQGKALRAQLGKDRPVWIAAS
THKGEDEQVLEAHKQILESHPHALLILVPRHPERFDDVFALCKKQGFETVRRTEKQPAEN
TTQIYLGDTMGEMLVLIGAADICFMGGSLIGDKVGGHNVLEPAALGVPVITGPSYYNFQD
LVDTMQREDCITLIYNARDLATSITLLMQGDYQHRRFRKYITKFVENNTGALKKTLRALK
ENS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcgaattatttatacggcactgttagcgcttgcctcaccatttcttttattg
ggcttatataaaagcaagcccaataaacccaaatttggtgggcgctggaaagaacacttt
ggaattaccccacagttaaaaacgcatcagcgtccaatttggattcatgctgtttctgta
ggcgaaagcatcgcggcaacacctctaatcaaggaactcaaacagcaatatccagagcaa
cctatcgttgtcacaacaaccacgagcactggtgcggaacaaatagccaagttgggtgat
ttagttgagcaccgctatatgccaatagactttggctttgctgtaaaaagcttcctaaag
gcaatacagccaaagaaaatgctgattatagagacagaactgtggccaaatacgctcaac
gtcgtcaaacaagccaatattccgatcaccgtagttaacgctaggctatcagaaaaatcc
tgtcaaaattacgcaaaagtccaatggctttttaaccaacttcatccatgcttgacgcaa
gtactttgtcaaacggattctgatgcagagcgatttgaacgcttaggtgtcaataaagag
aagctatcggtcacgggctcgattaaatttgatattcaaatttcagatcacgtgaagcaa
caaggcaaagcacttcgagcgcaacttggaaaagaccgcccagtatggattgcagcgagt
acgcataaaggcgaggatgaacaggtattagaggcacataaacagattttagaatctcat
ccccatgctctactcattttagttcctcggcatccggaacgatttgacgatgttttcgct
ctttgtaaaaaacaaggctttgaaactgtccgtcgcacagaaaagcaacctgcagaaaac
acaactcagatttacctaggcgatacaatgggtgaaatgctcgtattgattggtgcagca
gacatctgctttatgggtggcagtctaatcggagataaagtcggtggacacaatgtgtta
gagccagcagccctgggagtacctgtaatcacaggaccaagttattacaacttccaagat
ctggttgataccatgcagagagaagattgcattacgttaatttataacgccagagatctg
gcaacctctattactttgttaatgcaaggtgactatcaacatcgtcgttttcgtaaatat
ataactaagtttgtggaaaataatacaggggctttgaagaagacgctcagagcgctcaaa
gagaattcataa
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