KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0229
Entry
VP0229            CDS       T00120                                 
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00521  Streptomycin biosynthesis
vpa00523  Polyketide sugar unit biosynthesis
vpa00541  Biosynthesis of various nucleotide sugars
vpa01100  Metabolic pathways
vpa01110  Biosynthesis of secondary metabolites
vpa01250  Biosynthesis of nucleotide sugars
Module
vpa_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    VP0229
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    VP0229
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    VP0229
Enzymes [BR:vpa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     VP0229
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: BAC58492
UniProt: Q87T41
LinkDB
Position
1:242226..242789
AA seq 187 aa
MKVITTEIEGLLVVEPKVFGDSRGFFLESWNKLKFDEATGMEVSFVQDNHSKSESGTLRG
LHIQTKNAQGKLVRVVKGAVYDVAVDLRKDSKTYGKWFGLILSAENKKQLWIPKGFAHGF
LALEDDTEFLYKCDGYYDPLYEVSIDWNDKALAIDWGQFESFKTLKLSDKDSKGIGLSEF
STLEKEF
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaaagtgataactactgaaatagaaggtttattagttgttgagcctaaagtctttggt
gactctagaggttttttcctcgaaagttggaataaattaaagtttgacgaagcgactggt
atggaagttagttttgttcaagacaatcactcgaagtcagaaagtgggacattgagagga
ttgcatattcaaacaaaaaatgcccaaggaaaattagttcgagtggtaaagggggcggta
tatgacgttgctgtagatttgagaaaagattcaaagacatatggaaagtggtttggacta
attctctcagctgaaaacaaaaagcagttatggatacctaaaggatttgcgcacggcttc
ttagcattagaagatgatacagagtttctttacaagtgtgatggttattacgatcctctc
tacgaggtttccattgactggaatgataaagcgttggcaattgattggggtcagttcgaa
tcttttaaaactctaaagctgtcggataaagactctaagggcataggtctatctgagttc
agtacacttgaaaaggaattctaa

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