Vibrio parahaemolyticus RIMD 2210633: VP0235
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Entry
VP0235 CDS
T00120
Name
(GenBank) putative epimerase/dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00541
Biosynthesis of various nucleotide sugars
vpa00552
Teichoic acid biosynthesis
vpa01100
Metabolic pathways
vpa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VP0235
00552 Teichoic acid biosynthesis
VP0235
Enzymes [BR:
vpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
VP0235
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
CoA_binding
KR
adh_short
PglD_N
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BAC58498
UniProt:
Q87T35
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All DBs
Position
1:247555..249504
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AA seq
649 aa
AA seq
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MQRLQFIWQLSRTNKRIVSVLIDIILIFMAFHLAILVRSGDSNYFADPAVWGIQVAVTIV
TITVFARLGLYRAVLRYLTFQALFVVAAGAVISATLVAALSFYMSDPFPRTVPIIYGAFL
ALFCGGPRVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRVRAFIDGDSTL
CNTMILGLPVIAIEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKLPVEVLTVPDM
TDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQI
VEQSPKSIILFELSEFGLYQIDRELNQLKLEKGLTCDIIPLLGSVQRQHRLETTMSSFKV
QTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLISTDKAVRPTNVM
GTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTH
PEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLACNLIQLSGLEVKSDAN
PHGDIEIQFSGLRPGEKLYEELLIGDNVKQTAHERIMTAHEVHLPLKEYELLLNDLDFAC
HSMDHENIRTLLLSAPTGFNPTDGIGDLVWNHNQSEIDYSDAIQFMSQS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtctacaatttatatggcaactttctcggactaataaaagaattgttagtgta
ttgattgatattatattgatctttatggcttttcatttggcaatcttggttcgttctgga
gattccaattacttcgctgatcctgcagtttggggtattcaagttgcggtgacaatagtt
acgattactgtctttgctcgcttagggctctatagagcagtccttcgttaccttaccttt
caagctttatttgtagtagcagctggtgcggttatttctgctacgcttgtagctgccctt
agtttctacatgagtgacccgtttcctagaacagtccctattatctatggtgcatttctt
gcgcttttttgtggggggcctcgtgttatagttcgatctttgattgcacagagctactct
acacagagtaaagaggttcttatttatggcgcgggatccggtggccgacaacttgcaatg
gcattgagaagtagtggggactatcgtgtaagagcgtttattgacggcgattcaacacta
tgcaatacaatgattttgggcttacctgttattgctattgaagatgcaatgccaattatt
aataaatacgatgtttctcaagtcttactcgcagtaccaagtgctaagcgctcaaggcgt
aaggtcattctcgatgagttggctaaattacctgttgaagtacttacggtcccagatatg
acagatattgtctcagggaaagccaaaattgatgagcttaaggatgtcgcgattgaggat
ttgctggggcgtgacccggttgctcctcagcaagtattgttggaagctaatatcaaagac
aaagtggttatggtgacaggtgctggtggttctattggttccgagttgtgtcgtcaaatt
gtagagcagtctcctaaatctatcattttatttgaattgtctgaatttggtttataccaa
attgaccgggagttgaatcaacttaagttagagaaagggctaacttgcgacattattcct
ttgctgggttctgttcagcgccaacaccgcctagaaacgacaatgtcttcttttaaggtc
caaacagtatatcacgcagcagcatataagcacgttccattagtcgaatttaacgtaatt
gaaggtgtgcgtaataatatttatgggacttattatactgcgtgcgcggcgattaaagcc
ggtgttgaatcatttgtattaatctctacggataaagctgtccgccctactaacgtaatg
ggcacaaccaaacgaatggcagaacttggtctgcaggcacttgctgatcaagaaaatgca
aaaccaaatggtactcgattttgcatggtgcgatttggcaacgtcctcggttcttcaggc
tcagttattcctgtttttaaaaaacaaattgcatcaggtggaccagtaaccgtaactcac
ccagagatcactcgtttcttcatgaccattcctgaagctgcacagctagttattcaagca
ggagcaatgggtaaaggtggagatgtatttgttttagatatgggtgagtcagtaaaaatt
acagacttagcatgtaatctcattcaactatctggtcttgaagtaaaatctgatgctaat
cctcatggtgatattgagattcaattttctggacttcgacctggtgagaaactgtatgaa
gagttgcttattggcgacaatgtcaaacaaacagcgcatgagcgaataatgaccgcacat
gaggttcatttacctttaaaagagtacgaactactgttgaacgatctcgatttcgcctgc
catagtatggatcacgaaaacattcgtactttactattgagtgcaccaacaggctttaat
cctacagatggtattggcgacttagtttggaaccataaccaatctgaaattgattattca
gacgctatacaatttatgagtcaatcttaa
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