Vibrio parahaemolyticus RIMD 2210633: VP0252
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Entry
VP0252 CDS
T00120
Name
(GenBank) transcriptional repressor, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP0252
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VP0252
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
ClpB_D2-small
Motif
Other DBs
NCBI-ProteinID:
BAC58515
UniProt:
Q87T18
LinkDB
All DBs
Position
1:complement(262927..263934)
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AA seq
335 aa
AA seq
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MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESK
TIVTIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGML
LLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIA
QISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAM
LMMLELLKGHDVHSGSRLLETKLVVRGSAAPPQRA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatgaaggatgttgcccagcttgcgggagtgtcgacagctacggtatctcga
gcattaatgaatccagaaaaagtctcttcttcaacaagaaaaagagtcgaagatgccgtc
cttgaagcgggctattctccaaattcattagcgcgtaatctacgtagaaacgaatcaaaa
acgattgttaccatcgttcctgacatctgtgatccttacttttctgaaatcattcgtggt
atcgaagacgccgctatggaacatggctacctcgtactgctcggtgacagcggccagcag
aaaaagcgtgaaagctcgtttgtgaatctagtgttcaccaaacaagccgatggcatgtta
ctgcttggtaccgacctgccatttgatgtcagcaagccagaacagaaaaacctgccacca
atggtcatggcttgtgagtttgcgccagagctagaattaccaaccgtgcacattgacaac
ctaacgtctgcttttgaagcggtcaattacctaactcaacttggccataaacgcatagca
caaatttcagggccagacacagcggtattgtgccagttccgccagcaaggttatcaacaa
gccttgcgtcgcgcggggatcagtaaagacccacaatacagtgttatcactgagttttct
tttgacggcggcgcgaaagctgtacgtaagttgctagaacttccagagccaccaactgcg
attttctgccactgcgacaccatggcaatcggcgcaatccaagaagccaaacgactcggt
ctgcgcgttccgcaagatttgtcagtggttggtttcgatgatatcaactttgctcaatac
tgcgatccaccgttaacgaccatttctcaacctcgttatgaaattggccgccaagcgatg
cttatgatgcttgaactacttaaaggccatgacgttcattcaggttcacgcttactagaa
actaagcttgttgtccgtggtagcgcagcgccaccgcaacgcgcctaa
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