Vibrio parahaemolyticus RIMD 2210633: VP0308
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Entry
VP0308 CDS
T00120
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP0308
Transporters [BR:
vpa02000
]
Other transporters
Pores ion channels [TC:
1
]
VP0308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BAC58571
UniProt:
Q87SW4
LinkDB
All DBs
Position
1:302864..306631
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AA seq
1255 aa
AA seq
DB search
MIKKMFKWTKWLSLSLIGLLLLITIFVATVLFTHPGLKLAIWGAEKALPQLKVENIQGSL
FPRFALQNVSFVDESLHIDAKVERIALAINFRCFFDPKVCVDELALQGVNFQMPELPPAS
EEPEEETPPLRSISTPVPIFVNKVSFNDINVNVLGNQIDWQTFSTALSMQGDRLVIAPTA
LKDINVALAPSAAEPEAAAEEPKETDATPQDIVLPEVWIPLTVEARRLDIHNFKLAGETP
VIVNHLGLVARAGGERVDVKTLELDMPEVEGKLSTQVTLSADYPIKAQLDALVKQADAKG
QKLSLSASGSVGDLSLNATLSELVQAEIKGDIQPLKTQLPFDVSIKNVQAQWPLFGQSDY
QVSVPSLAAKGSLDGYEVALETKASGKDIPAVDVALNGKGTLEQIDLESLVVKTLGGELS
GKVMANWAAPINWQADLNLKNIQPGLQWKEAEGDISGSLSTSGSLTEQGGWQVSLPKLDI
DGILRGYPLNVEGQLEASDKNGKGEDIQLTTQGLALSHGPNQLSAKGKIDKQILMDVEVN
FPDFAKSVPDLAGKMQGKVALRGSLKEPDINLDLALNQINWQQQANVETITLKGDVTPLP
APKANLSLIANNITYDDIKVDSADLEVSGDEKLHQLTLDVVSDLVSTSLEIEGTFKQKPE
MIWDGALRRLTLSSQQGPWSLQKSTAVKVNIDKQIANVQAHCWLQAKSSVCLTEDISVGK
TGQAKLAINDFNFDQIKQFLPPETKLQGSVNAQAFAKWAPEKKPEVTLSVNMPKGQVEQA
LEQPIKVGWDSFSFKAALAKDKLDAEWLFDVKDNGDLSGKVSLLNVSSEKPTIDGKVALS
TFHLDFLAPLIGEYSLFKANMNTDLALSGDVMHPKVNGQFLIDQMKLQGEVTPIDINSGQ
VVINFKGHQADLDAGIITPDGKLEITGDADWRDLQDWRTRARVFAKELKVDMPPMVKIKV
EPDMTIDVTPQLAKVEGNINLPWGRIVIEELPPSAVGVSSDTVILNKDLQPVDEVAAMPF
NVETDINIKIGDDFQLAAFGLKGGLKGSLNVTQKDKGPFIVGEVNIVDGSYRSFGQDLVI
EEGKILMNGPADQPYVSIKAIRNPDNTQDDVIAGVRVTGPASDPSVEIFSEPAMPQANAL
SYLLRGQDIDGESGGNAMTTTLIGLSLAKSGRVVGEIGEAFGVQDLQLDTAGSGDDSQVT
VSGYILPGLQVKYGVGIFNSLGEFTVRYRLMQDLYLEAVSGVDSAVDLLYQFEFD
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaagatgtttaagtggaccaagtggttatcactaagtttgattggtctgctg
ttgttaatcactatttttgtcgctacggtactgtttacccatccagggttgaagctggcg
atttggggcgcagagaaagccttacctcaactcaaagtcgagaacattcaaggttcgcta
ttccctcgttttgcactgcaaaatgtcagctttgttgatgagtctttacatattgatgcg
aaagttgagcgcattgcgttggcgattaacttccgctgtttctttgacccaaaagtgtgt
gttgatgaactggcgttacaaggtgttaacttccaaatgccagaattgccacctgccagt
gaagagcctgaagaagaaacaccaccgctgcgttctatcagcacgccagtgccaattttt
gtcaataaagtcagctttaatgacatcaacgtcaatgtgttaggcaatcagattgattgg
caaacgttctcgaccgctttgtcgatgcagggcgatcgtttggtgatcgcaccaaccgca
ttgaaagacatcaatgttgcgctcgcaccaagtgcagctgaacctgaagcggctgccgag
gagccgaaagaaactgacgctacgccgcaagatattgtgttaccagaagtatggattcca
ctgacggtggaagcgcgtcgtctggatattcataattttaaactggcgggtgaaacgcca
gtgatcgtcaatcatcttggtttggttgcaagagcgggtggtgagcgtgttgatgtcaaa
acgttagagctcgacatgccagaagtggaaggcaagttaagcacacaagtgaccctttct
gctgattacccaatcaaagcgcaattggacgcgttagtgaagcaagcggatgcgaaggga
caaaaactgtcgctttcggcctctggttcggttggggatttatcgttaaatgctacgctt
tccgagcttgtacaagcggagatcaaaggtgacatccaaccgcttaaaacgcagttgccg
tttgatgtatcgatcaaaaatgttcaagcgcaatggccgctatttgggcaaagtgattat
caggtttctgtaccaagtttggcggcaaaaggttcacttgatggttacgaagtcgcatta
gaaaccaaagcgtcaggcaaagacattcctgccgttgatgttgcgctgaacggcaaaggt
acgctggagcaaatcgatctcgaaagccttgtagtgaaaactttggggggcgaactttcc
gggaaagttatggcgaattgggcggcgccaatcaactggcaagccgacctgaacctgaag
aacattcaaccaggattgcagtggaaagaagcagaaggggatatcagtggtagtctctcg
acttcgggatcgttaacggaacaaggtggttggcaagtcagtttgcctaagttagacatc
gacggcattttgcgaggttatccattgaatgtcgaagggcaacttgaagcgtctgataag
aatggcaaaggtgaagacatccaactaaccactcaaggtttagcgctttctcatggcccg
aaccaactgagtgcgaagggcaagatcgacaaacaaatcttgatggatgttgaggttaac
ttccctgactttgcgaaaagtgttcctgatcttgcgggtaagatgcaaggtaaagtagcg
ctacgtggtagtttgaaagagcctgatatcaatcttgatctcgctttaaatcagatcaac
tggcagcaacaggcgaatgtagaaacgatcaccttaaagggcgatgtgacgcctctgcca
gcaccaaaagcgaacttaagccttattgcgaataacattacctacgacgacattaaagtt
gatagcgcggatcttgaagtctctggagatgaaaaactgcatcaactgacgcttgatgtg
gtgtcagatctggtttcgaccagtttggaaatcgaagggacgtttaagcagaagccagaa
atgatttgggatggggcgctgcgccgcttgacgctgagctcgcaacaaggtccttggtca
ctgcaaaaatcgactgcggtgaaggtcaatatcgacaaacagatcgcgaatgttcaagcc
cattgttggttgcaagcgaagtcgagtgtgtgtctaaccgaagatattagtgtcggtaag
actggccaagcgaagttagcgatcaatgattttaatttcgaccaaattaaacaattcctg
ccgccagaaaccaagctgcaaggttcagttaatgcacaggcttttgctaaatgggctcca
gagaaaaagcctgaagttaccttgagtgtcaacatgccaaaaggtcaagttgaacaagca
ctagagcagccaattaaagtgggctgggacagcttcagctttaaagcggcattagcgaaa
gacaagcttgatgctgagtggttatttgatgtgaaagataacggtgacttgtctggtaag
gtttctttactgaatgtctcatctgagaagccaactattgacggtaaggttgcgctttct
acgttccacttggacttcttggctccgttgatcggggaatacagcttgttcaaggctaat
atgaatactgatttggccttgtctggtgatgtaatgcatccaaaagtgaatggtcagttc
cttatcgatcaaatgaaactgcaaggcgaagtgacgccaatcgacatcaactccggacaa
gtcgtgatcaactttaaaggtcaccaagcggatttggatgctgggatcattacgcctgac
ggtaagctagaaatcaccggtgatgctgactggcgtgacctgcaagactggcgcactcgt
gcccgtgtgtttgcaaaagagctgaaagttgatatgccgccgatggtcaaaatcaaagtt
gaaccggacatgaccattgatgtcacgccgcagttggcgaaggtggaaggtaacatcaat
ctgccgtggggacgtatcgtcattgaggaactgccaccaagtgcggttggtgtgtcgagt
gatactgtgattttaaataaggatttacagccagttgatgaagtggctgctatgccattc
aacgtcgaaacggacatcaacatcaagattggtgacgacttccaacttgcggcgtttggc
ttgaagggcggcttgaaaggtagccttaacgtgacacaaaaagacaaaggaccattcatc
gttggtgaggtaaacatcgttgacggttcttaccgttcatttggtcaagatttggtgatc
gaagaaggtaagatcttaatgaacggtccagcggatcaaccgtatgtatcgatcaaagcg
attcgtaaccctgacaatactcaagacgatgtgatcgcgggtgtgcgtgtgactggccca
gcttccgatccgagtgtggaaattttctcggagcctgcgatgccacaagccaacgcgttg
tcttacctgcttcgtggtcaagatattgatggtgagtcgggtggtaacgcgatgacgacc
acattaattggtctgagtttggcgaaaagcggtcgtgttgttggagaaatcggtgaagcc
tttggcgtacaagatttacagcttgatacggcaggctcgggtgatgactctcaagtgacg
gtgagtggttacattttgccaggtctacaggttaagtatggtgttggcatcttcaactcg
ctgggtgagttcacggtgcgttaccgattgatgcaagacctgtatttagaggcggtatct
ggtgtagatagcgcagttgacctactctatcaatttgaatttgattag
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