Vibrio parahaemolyticus RIMD 2210633: VP0351
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Entry
VP0351 CDS
T00120
Name
(GenBank) putative long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00061
Fatty acid biosynthesis
vpa00071
Fatty acid degradation
vpa01100
Metabolic pathways
vpa01212
Fatty acid metabolism
vpa02024
Quorum sensing
vpa04146
Peroxisome
Module
vpa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VP0351
00071 Fatty acid degradation
VP0351
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VP0351
09145 Cellular community - prokaryotes
02024 Quorum sensing
VP0351
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpa01004
]
VP0351
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpa04147
]
VP0351
Enzymes [BR:
vpa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VP0351
Lipid biosynthesis proteins [BR:
vpa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VP0351
Exosome [BR:
vpa04147
]
Exosomal proteins
Exosomal proteins of breast milk
VP0351
Exosomal proteins of breast cancer cells
VP0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAC58614
UniProt:
Q87SS1
LinkDB
All DBs
Position
1:346021..347829
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AA seq
602 aa
AA seq
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MAKLDFHIVKRIREQIANGGTRVALKHKVAGAWQGITWEQFGQQVDTLSLALLAQGLGVQ
DKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNTAAQSAYIIDNADVKVLFVGEQPQFD
AAVSIFEQCEQLELIVAMSDDIELGDHDFAISWKDFVAKGDTSHQAELDERLEQAKVDDL
LTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVSLCFLPLSHVFERAWTFYV
LYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIMFTWA
VNMGAKMALCHQEKRKPSMMLRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR
FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKIGENNEILVRGPMVM
RGYYKMPEETEKTFDEHGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQMIEGA
IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEK
RVNELQKELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYNEKSD
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttagattttcatatcgttaaacgtattcgtgaacaaattgcgaacggtggt
acccgcgttgcactgaaacataaagtagcaggagcatggcaaggtattacttgggagcag
tttggtcagcaagttgatactttatcgcttgcacttttggctcagggtttaggagtccaa
gataagatcggcattttctcaaacaacatgccgcaatggacgattgctgatttcgccgca
ttgcaactgcgtggcgtgacggtgcctatctacccaaccaatactgccgctcagtcggca
tacatcatcgacaacgcagacgtaaaagttctgtttgttggcgaacagcctcagtttgat
gctgctgtgagcatttttgaacaatgtgagcagttagagctgattgttgcgatgtcggac
gatattgagcttggcgatcatgactttgctatctcttggaaagactttgtcgcaaaaggc
gatacaagccatcaagctgaacttgatgagcgtttggaacaagcgaaagtcgatgatttg
cttacgctgatctacacctcaggtacaacgggtcaacctaagggcgtgatgttagattat
ggcaacatcgcagcgcagctagaaggtcacgaccaacgcttgagcttatctcaagatgat
gtttctttgtgtttccttccgctttcacacgtatttgaacgcgcttggacattctacgta
ttatacaaaggtgcgacgaactgttacttgcaagacaccatgcaagtgcgcgatgccttg
agtgaagtgcgtccaaccgtgatgtgtgcagttcctcgtttctacgaaaagattttctca
gcgattcacgagaaagtgtctcgagcaccgattcatcgcaagatcatgtttacttgggcg
gtgaacatgggcgcgaaaatggcactttgccatcaagaaaaacgcaaaccttcgatgatg
ctgcgcaaagcacacgcattagctgacaagctggtgctcagtaagctgcgtgcactgctc
ggtggtcgtatcaactttatgccatgtggtggcgcgaagttggatgaaaccattggtcgc
ttcttccatgctattggcatcaacgtgaagttgggctacggcatgacagaaaccaccgcg
acgatttcgtgctgggatgacaagtgctttgatccggattctatcggtatgtcgatgcct
ggcgcgcaagtgaagattggcgaaaacaacgagattctagttcgtggcccgatggtgatg
cgcggttactacaaaatgccagaagagaccgaaaagacgtttgatgagcacggtttctta
aagaccggtgatgctggccatattgatgaaaatggcaacctgttcatcaccgatcgcatt
aaagaactgatgaaaacctctggtggtaaatacattgcaccgcaaatgatcgaaggtgcg
attggtaaagaccacttcattgagcagattgcggtgattgccgatacacgcaagtttgtt
tctgcgctgattgtgccgtgttttgactctcttgaagaatatgcgaaagaactgaacatt
gcataccatgaccgagttgagcttatcaaacaccaccaagtggtcgaaatgcttgagaag
cgagtgaatgaactgcaaaaagaactggcgaaatttgagcaagttaagaagttcaaactg
ctaccaagagctttctctatggacgatggagagttaacgccaacgcaaaaactgcgtcgt
aaagtgattaacgataaataccaagacgaaatcgaagaaatgtacaacgaaaagtcagat
aaaaagtaa
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