KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0415
Entry
VP0415            CDS       T00120                                 
Name
(GenBank) putative general secretion pathway protein A
  KO
K02450  general secretion pathway protein A
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP0415
Secretion system [BR:vpa02044]
 Type II secretion system
  General secretion pathway protein
   VP0415
SSDB
Motif
Pfam: GspA_C39-like AAA_22 AAA_16 PG_binding_1 AAA_30 AAA_19 TniB AAA SLFN-g3_helicase AAA_5 TsaE ABC_tran AAA_14 AAA_7 ResIII DEAD TrwB_AAD_bind PIF1 cobW NB-ARC AAA_18 PG_binding_3 NTPase_1 Sigma54_activat COX4 AAA_11 nSTAND3 AAA_25 NPHP3_N NACHT AAA_24
Other DBs
NCBI-ProteinID: BAC58678
UniProt: Q87SK8
LinkDB
Position
1:414714..416333
AA seq 539 aa
MYKDFFGFVEQPFSIVPNSRYLYLSQRHKEAITHLNAGLGDGGGFAMLTGEVGTGKTTVA
KAMLANLDESTKAGLILNPTFSSRDLLEAICDEFKISYPQDATLKQLNQVIHHYLLRNHK
VGWQTLLVIDEAQHLAADVLEQLRLLTNLETDTRKLLKVLLVGQPELQRLLQTTQLRQLA
QRITGRYHLLPLDEKETADYIAFRLHTAGGDQQLFHRSSSKLIAKYSHGIPRLINLICDK
ALNMSYHQGSVVVDKQTVQQACEEVMQFQADIYQQDKPRQSFTWPAWGSAAIGVMAAVGV
GWAAINYMPMKPKAPMSEVPVAASSSTPAPLMATEQLTDAQRDMLLAQKQSNLAVNDLYR
LWGYRASVRDNLCLSEPQSTMRCERKMATWPLLMQQNRPVILELNYQGDVGYVILYAVGN
DQVEVLNGKQRLRLPVSWLKPMWQGNIIELWQAPLKETLRLDMEGPAIEVLDQLLAKAVS
ESPLETSIFDGALKERVELFQRWQGIGVDGIAGHRTLERLQQSVQPNAPTLASINKEEA
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgtataaggacttttttgggtttgttgaacagccgttttcgattgttccaaactcacgt
tatttgtatttaagccaacgtcataaagaagcgatcacgcacctcaatgcgggattgggc
gacggcggtggttttgccatgctgaccggtgaggtagggactggcaaaacgacagtggcc
aaagccatgctcgcaaatttagatgaaagcaccaaagcggggctgattctcaatccgact
ttttcgagccgagatctgctagaagcgatttgcgatgaatttaagatctcttatccgcag
gatgcgacgttaaaacagctaaaccaagtcatacatcattatttgctgcgtaaccacaag
gtgggttggcagacgttgctcgtcattgatgaggctcagcatcttgctgccgatgtactt
gagcaactgcgcttgttaacgaacttagaaaccgataccagaaagctgcttaaagtgctg
ttggtagggcagccagaattgcaacgcttgttacagactacgcagttgcgtcagctcgca
cagcgtatcactggccgttatcatctgttacctcttgatgagaaagagactgcggattac
atcgcgtttcgtttgcacacggctggtggtgatcagcaactgtttcatcgcagttccagt
aagttgattgcgaagtatagccatggcattccgcgtctcatcaacctgatttgtgataaa
gcattgaatatgagttatcaccagggcagtgtcgttgtcgataaacagacggtgcaacaa
gcctgcgaagaagtcatgcagtttcaggcggacatttaccagcaagataaacctcgtcaa
tcatttacatggccagcgtggggatcggctgctattggtgtaatggcagcggttggtgtc
ggctgggctgcaataaattacatgccaatgaagccaaaggctccgatgtcggaagtaccc
gttgctgcgtcttcgtctactcctgctcctcttatggcaactgagcagctaactgatgca
cagcgcgatatgctgttggcgcagaaacaatccaatcttgccgtgaatgatctttaccgc
ctttggggatatcgagcatcagtgcgcgataatctttgcttgtctgagcctcaatccacc
atgcgttgtgaaagaaaaatggcaacgtggcccttgctgatgcagcaaaatcgaccggtt
attttagagctgaattatcaaggcgatgttggttacgtgattttgtatgcggttggcaac
gaccaagtagaagtactcaatggcaaacagcgtctacgtttgcctgtttcgtggctgaaa
cctatgtggcagggcaacatcattgaattgtggcaagcgccgcttaaagagacgttgcgt
ttagatatggaagggccggcgatagaagtgcttgaccaattgcttgccaaagcggtgagt
gaatcaccactggaaacgtccatttttgacggtgcgctaaaagagcgagtggaactgttc
caacgttggcaaggcattggtgtggatggcattgcgggtcatcgcacgttagaacgctta
caacaaagtgtgcaacctaatgcgccaacactagcaagcattaacaaggaggaggcgtaa

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