KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0430
Entry
VP0430            CDS       T00120                                 
Name
(GenBank) topoisomerase IV, subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpa03032]
    VP0430
   03036 Chromosome and associated proteins [BR:vpa03036]
    VP0430
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vpa02048]
    VP0430
Enzymes [BR:vpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VP0430
DNA replication proteins [BR:vpa03032]
 Prokaryotic type
  DNA Topoisomerases
   VP0430
Chromosome and associated proteins [BR:vpa03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    VP0430
Prokaryotic defense system [BR:vpa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    VP0430
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C DUF993 HATPase_c_3
Other DBs
NCBI-ProteinID: BAC58693
UniProt: Q87SJ3
LinkDB
Position
1:432981..434861
AA seq 626 aa
MTEQYNAGAIEVLNGLEPVRRRPGMYTDTARPNHLGQEVIDNSVDEALAGHASKVQVILH
ADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVN
ALSKRVEVTVRRDGQVYEIAFEHGDKVSDLTVTGTCGRRNRGTSVHFWPDAKYFDSANFS
VTRLVNNLRAKAVLCPGLEITFTDKVNNKDYQWYYEDGLKDYLAEGVKGYPVLPEEPFTG
EFSADTEAANWAVIWQPEGGEMITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNL
LPRGVKLTGDDVFDRCSYVLSVKIQDPQFAGQTKERLSSRQTAAFVSGVVKDAFSLWLNE
KPQLAEQLAEVCIANAHRRMRASKKVVRKKVASGPALPGKLTDCSVQDLNRTEIFFVEGD
SAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLDSL
RYGKICILADADSDGLHIATLLCALFTRHFRALVEAGHIYVAMPPLYRIDCGKEVFYALD
DDEKDGILERLSKKKAKINVQRFKGLGEMNPIQLRETTMDPNTRRLVQLTIDDSEATMEM
MDMLLGKKRADDRRSWLQNNGDLAEV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgactgaacaatataatgctggtgccattgaagtactgaatggccttgagccagtacgt
cgccgaccagggatgtatacggatacagcgcgcccaaaccacttgggccaagaagttatc
gataacagtgtcgatgaagcgctagccggacatgcctcaaaagtacaagtcatcctacat
gctgaccaatcactagaagtgatcgatgatggtcgaggcatgcctgttgatatccaccct
gaagagaaagtatctggtgttgagctgatcttatgtaagctccatgcgggtggtaaattc
tccaacaaaaactaccagttttcaggtggtttgcacggtgtaggtatctcagtagtaaac
gcgctgtctaagcgagttgaagtgacggtacgtcgtgatggtcaagtgtacgaaattgct
tttgagcacggtgacaaagtatcagaccttactgtaacgggcacatgtggtcgccgcaat
cgcggtactagcgtgcacttttggccggatgcgaagtatttcgattcagctaacttctct
gtaactcgtttggtgaacaacctacgagcgaaagcggtactttgcccaggtctagaaatt
acgtttaccgataaagtaaacaacaaagactaccagtggtactacgaagatggtttgaaa
gactatctagccgaaggcgtaaaaggttacccagtactaccagaagaaccgtttactggg
gagttttctgcagatacagaagcagcaaactgggcagtaatctggcagccagaaggcggc
gagatgatcaccgaaagttacgtgaaccttatcccaacagctcagggtggtacacacgta
aatggtcttcgccaaggtctgttggatgcgatgcgcgagttttgtgaattccgcaacttg
ctaccacgtggtgtgaagctaacgggcgatgatgttttcgaccgttgttcgtacgtgttg
tcggttaagatccaagatccacagtttgctggtcagactaaagagcgtctctcttcgcgt
caaaccgctgcgtttgtctctggtgtggtaaaagatgcattcagtctgtggctaaacgaa
aagcctcaacttgcagagcaactagcggaagtgtgtattgctaacgcgcaccgtcgtatg
cgcgcaagcaagaaagtcgtacgtaagaaagtcgcatcgggtcctgccttgccaggtaag
ctaacagactgttccgtacaagacttaaatcgcaccgaaatcttcttcgtggagggtgac
tcggcgggtggcagcgcgaagcaagcccgagatcgtgaattccaagcggtaatgccactg
cgtggtaagatcctaaacacatgggaagtctctgccgatcaagttctggcatctcaagaa
gtgcatgacatctcggttgcgttgggtatcgaccctgacagcgacaaccttgacagccta
cgctacggtaaaatttgtatccttgccgatgcggactcggacggtcttcacatcgcaacg
ctattgtgtgctttgtttactcgtcacttccgcgcgctcgttgaagcgggtcatatctat
gtagcaatgccgcctctgtatcgaatcgactgtggtaaagaagtcttctacgccctcgat
gacgatgaaaaagatggcattctagaacgtttgtcgaagaagaaagccaaaataaacgta
caacgattcaaaggtctgggtgagatgaacccaattcagctacgcgagaccacaatggat
ccgaacacgcgtcgtttggttcaacttacgatcgacgactctgaagccactatggaaatg
atggacatgctgctaggtaaaaaacgcgcagatgaccgtcgttcttggctacaaaacaac
ggcgatttggcagaggtttaa

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