Vibrio parahaemolyticus RIMD 2210633: VP0456
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Entry
VP0456 CDS
T00120
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00300
Lysine biosynthesis
vpa00550
Peptidoglycan biosynthesis
vpa01100
Metabolic pathways
vpa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VP0456
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VP0456
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VP0456
Enzymes [BR:
vpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
VP0456
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAC58719
UniProt:
Q87SG8
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All DBs
Position
1:457204..458568
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AA seq
454 aa
AA seq
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MIKVTLSQIAEITGGALFGNDLTIDAVSTDTRTIDNGALFVALVGERFDAHNFCQQAFEA
GAGALLVEKRLDVNAPQVVVSDTKIALGELASWVHHSCQTPTVAITGSCGKTTVKEMVAS
ILQQKGNVLFTAGNFNNDIGVPLTLLRSQQDDDYAVIELGANHIGEIAYTTQLVKPVIAL
VNNVAAAHLEGFGSIEGVKQAKGEIYQGLQAGGIAIVNLDSNGDALWQSVLADKKVITFS
HNNSQADFYASNVTMNEEGKASFTLHISSDSREIELSLGIIGQHNVANAIAASIIALHMG
ATVEEIQFGLLNLNKVKGRVDVEQLSSTIKLIDDSYNASVPAMKAAVDLLGAFHGQRWLI
LGNMAELGEESLALHRQVGEHAAPQKFEHVLTYGADAKIISELCHGIHFETHQEMIDYIK
QHLDQTVSDQHTILVKGANGARMFEVAAALKEYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggttactttatctcaaattgcagaaatcactggcggagcgttattcggtaac
gatctgactatcgacgcagtgtccactgacacgcgaacgatcgacaatggtgcgctgttt
gttgcgcttgtcggtgaacgattcgatgcgcataatttttgtcagcaagcatttgaagcg
ggggctggtgccttattggttgaaaagcgtcttgatgtgaatgcgccgcaagtcgtggta
tcggataccaaaatcgcactgggcgagttagcttcttgggtgcaccattcttgccaaacg
cctaccgttgcaataactggcagctgtggaaagaccacggtgaaagagatggttgccagc
attcttcagcaaaaaggcaacgtgttgttcacggcaggtaacttcaataatgatattggt
gttccgctgaccttgctgcgttctcagcaagatgacgattacgcggtgattgagctaggc
gcaaaccatattggtgaaattgcttacactacgcagcttgtgaaaccggttatcgcgctg
gtaaacaatgttgcggcggcgcatttggaaggctttggttctattgagggtgtaaagcaa
gccaaaggtgaaatctatcaagggttacaggctggtggcattgccatcgtcaatctcgat
agtaacggtgacgcgctgtggcaatcggttcttgcagataaaaaagtgatcactttctcg
cataataattcgcaagcggacttttacgcatcgaacgtgacaatgaatgaggaaggtaaa
gcgagctttactttgcatatttcatcagattcgcgagaaattgaactgtcacttggtatt
attggtcaacataacgttgcaaacgctattgcggcctcaatcattgcgctacacatgggg
gcaaccgttgaagagattcagtttggtcttttaaaccttaacaaagtaaaaggccgagtg
gatgtagagcaacttagctcgacgatcaagttgatcgatgacagctacaatgcaagcgta
cctgcgatgaaagcggcggttgatttgcttggggcgtttcacggtcagcgctggttgatt
ttaggcaatatggcggaattgggtgaggaaagtcttgcacttcaccgtcaagtcggggaa
catgctgccccacaaaaatttgaacatgttctcacatatggtgcagatgcaaagatcatt
agcgagctttgccatggcattcactttgagacacatcaagagatgattgactacatcaag
cagcatctagaccaaaccgtttctgaccaacacactattttggttaaaggcgcgaacggt
gcacgtatgtttgaagtcgctgctgctttgaaggagtatttttaa
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