Vibrio parahaemolyticus RIMD 2210633: VP0458
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Entry
VP0458 CDS
T00120
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00470
D-Amino acid metabolism
vpa00550
Peptidoglycan biosynthesis
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VP0458
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VP0458
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
VP0458
Enzymes [BR:
vpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VP0458
Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
Precursor biosynthesis
Amino acid ligase
VP0458
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
NAD_binding_7
DAO
NAD_binding_8
TrkA_N
Lycopene_cycl
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAC58721
UniProt:
Q87SG6
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All DBs
Position
1:459690..461003
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AA seq
437 aa
AA seq
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MERWQNIHNVVVVGLGITGLSVVKHLRKTQPQLTVKVIDTRDNPPGAERLPEQVELHRGG
WNTQWLAEADLVVTNPGIALATPEIQTVLAKGTPVVGDIELFAWAVNKPVVAITGSNGKS
TVTDLTGVMAKAAGLTVGVGGNIGVPALELLEQDADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYEGMADYRAAKLRIFDHAELAVVNRDDQETYPEVEMPVVTFGSDEQAYGL
EVDGSRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAAGVDYHNALNALKNYTGL
THRCQVVADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGKGADFTPLKPIF
ATLNLQLCCFGLDGDDFMPLHESAIRFNTMEDVIQQISSQLKSGDMVMLSPACASFDQFD
NFMARGDAFAVLAQKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacataacgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctccgaaaaactcagccgcaattgacggttaaagttattgatacg
cgtgacaatccgccaggtgccgagcgtctgcctgaacaggttgaactacaccgtggtggt
tggaatacccagtggcttgccgaggcggacttggtggtgaccaaccctggtatagcgttg
gcgacaccagagatacaaacggtgctagcgaaaggcacgcctgtcgtgggggacatcgag
ttgtttgcttgggctgtgaataagccagtggtggccatcacgggttcaaacggcaagagc
acggtgacagatttaactggtgtgatggcaaaagcggcaggattgacggtgggtgtcggc
ggtaacattggcgtgcctgcactggagctgcttgagcaagatgcggatttgtatgtactg
gaactttcaagttttcagttggaaacgacgtcgagtttgaaactcaaagcggcggcattt
cttaacctttccgaagatcatatggatcgctacgaaggtatggcagattatcgcgctgct
aagttgcgtatttttgatcatgcagagttagccgtggttaaccgtgatgaccaagagacg
tacccagaggttgagatgcctgtggtcacgtttggcagcgatgagcaagcttacggcctt
gaagtcgatggttctcgcacatggttacttgatcatggtcagcgcgttatcgccagcgat
gaattgaaacttgtcggcaaacataacttagcgaacgctctcgtcgtgttggctctgctc
aaagctgcaggtgttgattaccacaacgctttgaatgcacttaaaaattacactggactg
acacaccgatgccaggtggttgcggataatcgtggcgtaaaatgggtgaatgactctaaa
gcaactaatatcgcaagcactatggctgcgctatcaggattagagtcgaccggtaaactt
tatctgctcgttggtggtgtcggtaaaggcgcggacttcacgccattaaaaccgatcttt
gcaacgcttaacctacaactgtgctgttttggtctagacggtgatgattttatgccacta
catgagtcagcaatccgtttcaacaccatggaagatgtgattcaacaaatatcttcgcag
ttaaaatctggtgatatggtgatgctgtctcccgcatgtgctagctttgatcaattcgac
aattttatggcaagaggcgatgcatttgctgttcttgctcagaaatatgcataa
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