KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0500
Entry
VP0500            CDS       T00120                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VP0500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpa03400]
    VP0500
Enzymes [BR:vpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     VP0500
DNA repair and recombination proteins [BR:vpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VP0500
 Prokaryotic type
     VP0500
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BAC58763
UniProt: Q87SC4
LinkDB
Position
1:515261..515941
AA seq 226 aa
MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGSHAQKKGRFIDRSKH
HVLAAPHPSPLSAHRGFLGCKHFSQANQLLASQGKEPINWHLPLTV
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaagcagagctacttt
gtagacacgttgaattttgttgaagcagaacgagcagcaggcaaagcgatttatccgcca
gcaaaagatgtttttaacgcatttcgtttcacggagtttaacgatgtgaaagtggtgatc
ttaggacaagacccataccacggtccaaatcaggcgcatggtttgtgcttctcagtgctt
cctggaatcaaaacgccaccgtcgctcgtgaacatgtataaagaattggctcaagatatc
gaaggattccagatccctcagcacggattcttgcaaagctgggcagagcaaggcgtattg
ttgctcaatacggttttgacggttgagcaaggcaaagcgcactcacactctaaaacaggg
tgggaaacattcacagaccgagtgattgaagcgataaaccagcatcagcatggggtcgtg
ttccttttatggggttctcacgctcagaagaaaggacgtttcatcgaccgctcgaagcac
catgtattagccgcgccgcatccatcgccattgtctgctcatcgagggttcttgggttgt
aagcatttctcccaagcaaaccaattacttgcttcgcaaggaaaagagccaatcaactgg
catttaccgttaacggtataa

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