Vibrio parahaemolyticus RIMD 2210633: VP0529
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Entry
VP0529 CDS
T00120
Name
(GenBank) transcriptional activator HlyU
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP0529
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
VP0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_11
HTH_24
DUF7346
DUF7344
MarR
HTH_27
HTH_34
DUF2582
TFIIE_alpha
HTH_28
Mga
HxlR
HTH_IclR
Rrf2
HTH_45
DUF7347
Dimerisation
HTH_1
TrmB
DUF6432
Motif
Other DBs
NCBI-ProteinID:
BAC58792
UniProt:
Q87S95
LinkDB
All DBs
Position
1:545888..546184
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AA seq
98 aa
AA seq
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MNLQEMEKNSAKAVVLLKAMANERRLQILCMLHNQELSVGELCTKLELSQSALSQHLAWL
RRDELVATRKEAQTVYYTLKSDEVKTLIQTLHGLYCAN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacaagaaatggagaaaaactccgcaaaagccgtcgtgttgctcaaagcgatg
gcaaacgaaagacgcctacaaattctttgtatgctgcataaccaagagttgtccgttggg
gagctgtgtaccaaactggaattaagccagtcggcgttatcgcaacatttagcttggctt
cgtcgtgacgaattggtcgcgacgagaaaagaagcgcaaacggtgtattacacgttaaag
agtgatgaggtgaagacattgattcaaacccttcacggtctttattgcgcaaactga
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