Vibrio parahaemolyticus RIMD 2210633: VP0648
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Entry
VP0648 CDS
T00120
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP0648
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VP0648
TLS (translesion DNA synthesis) factors
Other SOS response factors
VP0648
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
DUF4335
AAA_22
CcmH
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAC58911
UniProt:
Q87RX8
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Position
1:complement(676920..678584)
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AA seq
554 aa
AA seq
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MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRADAGMVRQGEE
KTEVSAAFLLDNNLHATRWLEDNDLLDGTECILRRIITKEGRSRAFINGSPVPLSQLKSL
GQLLINIHGQHAHHQLMKSEYQMAMLDQYAGHLNLLKSTRSAYQHWRQADNNLKQLKENS
QQNQAQKQLLEYQIKELNELSLGEEEFAELEQEHKRLSNSGELAATCQQALELIYEGEEV
NALGILQSANHSLIQLAELDEKLAELPNMLADAMIQLEETKNELRSYLDGIDVDPGRMAY
VEERFSKVMSMARKHHVMPDELYQHHQDLLAQIEALDCSDERLDELAQEVEQKYQSFLTQ
AEKLHKSRSRYAKELNKLITQSMHELSMEKAVFSIEVNNENTHPSPLGMDSVCFLVSTNP
GQPLQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQMFVAKHTKGGQTETQMRALDEEQRVAELARLLGGSQIT
DSTLANAKELLIAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcatctaagtgttaataattttgcgattgttaagtctttacaactcgagctt
tctaagggcatgaccaccattacaggtgaaacaggcgctggtaaatctattgcgattgat
gcgttaggtctgtgcctaggcggacgtgccgatgcaggtatggtgcgtcaaggtgaagag
aaaaccgaagtcagtgccgcctttttactggacaacaacctacatgcaacgcgttggcta
gaagataacgatctgctggatggcactgaatgtatcttgcgtcgcatcataactaaagaa
ggccgttcaagagccttcatcaacggcagcccagtaccactttcacaattaaaatctctt
gggcagctgttaatcaacatccatggacaacacgcgcatcaccaactgatgaaaagcgaa
taccaaatggcgatgttggatcaatatgccggacacttaaatctattaaagagtacacgc
agtgcgtaccaacattggcgtcaggcagacaataacctcaagcaactcaaggaaaacagc
cagcagaatcaggcgcaaaaacagttgcttgaataccaaatcaaagaactgaatgagcta
tcgctaggtgaagaagaattcgcagaactcgagcaagagcacaaacgactgtccaatagc
ggtgaactcgccgctacctgtcagcaagccctcgaacttatttacgaaggtgaagaagtc
aatgcgcttggtattttgcaatcggccaatcactccctaattcaattagcggaattagat
gaaaaattagccgagctaccaaatatgctggctgacgcgatgatccagctagaagaaacc
aaaaacgaacttcgtagctacttggatggcatcgatgtcgatccaggtcgtatggcttat
gtcgaagagcgtttttctaaagtgatgtcgatggctcgtaagcatcatgttatgcctgat
gagttataccaacatcaccaagaccttctagcacaaatcgaagcattggattgctctgat
gaacgtctggatgaattggctcaagaagtggaacagaaataccaaagcttcctgactcaa
gcggaaaagctgcataaatcacgcagccgttacgcaaaagaactgaacaagctgatcacg
caaagcatgcacgaactgagcatggaaaaagccgtcttcagcattgaagtaaacaacgaa
aacacacatccgtcgccattggggatggacagtgtgtgcttcttggtttccactaacccg
ggtcaacctttacaaccaattgcgaaagttgcgtcaggtggtgagttatcccgaatctcg
ctagcgatccaagtgatcactgctcaaaaagtagatacgccaagtttgatcttcgatgag
gtggacgtgggtattagtggcccaacagctgcggtagtaggcaaaatgctacgcaagctt
ggagaatcgactcaagtcatgtgcgtcacccacttaccgcaagtagcaggttgtggccac
caacaaatgtttgtcgcaaaacacaccaaaggtggtcaaacggaaacacaaatgcgcgca
ctagatgaagaacaacgtgtggcagaactggctcgtttactcggtggtagccaaatcact
gattcaacattagctaacgcgaaagaactccttatcgccgcctaa
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