Vibrio parahaemolyticus RIMD 2210633: VP0665
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Entry
VP0665 CDS
T00120
Name
(GenBank) transglycosylase, Slt family
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
VP0665
Enzymes [BR:
vpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VP0665
Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VP0665
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
OpuAC
Motif
Other DBs
NCBI-ProteinID:
BAC58928
UniProt:
Q87RW1
LinkDB
All DBs
Position
1:complement(693621..695210)
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AA seq
529 aa
AA seq
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MYRSMQIRHFNRLKRSVLLFASVLLLSACQIESQPKSEFEKIQERGVLRVGTLNNQLSYY
IGPDGPAGLDYELARKFAEELGVKLEIKPAFRQADLFPALKKGDIDIIATGLNQTSQAVK
RFRPGPAYYYVSQQVVYKKGQLRPRDIEQLIEYQASKDSQSEEDVNAGAQTLKIVEQSQY
VPTLTALKKQYPELQFEIVGDADTRDLLKHVSTGELRFTVTDSVELSLAQRLYPDLALAF
ELTEDQPVSWFTRRSEDESLYAMLIEFFGNIKQSGELASLEEKYIGHIEAFDYVDTRAFI
RALDDKLPRWAPLFQKYSEEFDWRLIAALAYQESHWKPKAKSPTGVRGMMMLTLPTAKSV
GVTDRLNPEQSVRGGVEYLRRIVARVPDTINEHEKIWFALASYNIGYGHMMDARRLTKAQ
GGDPNAWADVKDRLPLLRQKRYYSQTRYGYARGDEARNYVENIRRYYQSIIGHVSQKPSI
DEDTDDLQVIPPLNPELLISGAVETIAEEVSGASDITNEVDEDLDQEEE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgatcaatgcaaatacgccacttcaaccgactcaagcgcagcgtcctacttttt
gcttctgtgctactactttctgcctgccaaattgagtcgcagccgaaaagtgaattcgag
aaaatccaagagcgcggagtgctacgcgttggcacgctcaacaaccaactctcgtactac
attggtcctgatggccctgcgggtttggattatgagctggcgcgcaaatttgcagaagag
ttgggcgtaaagctagaaatcaaacccgctttcagacaagccgaccttttccctgcctta
aagaagggcgacatcgatattattgctacggggcttaatcaaacctcacaagccgtcaaa
cgttttagacctggccctgcttattattatgtaagccagcaagtggtctacaaaaagggc
cagcttcgtcctcgtgatattgagcagcttatcgagtatcaagcatccaaagacagtcaa
tcagaagaagacgtgaatgctggcgcacaaacattgaaaattgtcgaacagtcacaatat
gttccgacactgacggcattgaagaagcagtatcctgaattgcagtttgaaatcgtgggc
gatgctgacactcgcgatctactgaaacatgtatcgactggagaactgcgtttcaccgtc
actgattccgtagaactgtccctcgcgcaacgcctgtatccagatttagcacttgctttt
gagctcaccgaagatcaaccagtatcatggtttactcgccgctcagaggatgagagcttg
tatgcgatgctgattgagtttttcggcaatatcaaacaatctggcgagctagcttctctt
gaagagaagtacattggccatattgaagcgtttgactacgtggacacgcgtgcctttatt
cgtgctcttgatgataagttgccgagatgggctccgctgttccaaaaatacagcgaagag
tttgattggcgtttaatcgcggctttggcctaccaagaatctcattggaaaccaaaagca
aaatcgcctacgggtgttcgtggcatgatgatgctgactttaccaactgcgaaaagtgtt
ggtgtaaccgatcgtctaaacccagagcaatctgttcgtggtggtgtggaatacctgcgt
cgcatcgtcgctcgcgtacctgatacgattaacgaacatgaaaaaatttggtttgcattg
gcatcgtacaatattggttatggccacatgatggacgcgcgtcgattaaccaaggcacaa
ggtggcgatccaaacgcatgggcggatgtaaaagaccgactgccgctgttacgacaaaag
cgttactacagccaaacccgttatggctacgctcgtggagacgaggcgcgtaattacgtt
gaaaatattcgacgctactaccaatcaatcattgggcatgtcagtcaaaagccttccatt
gatgaagatacggatgatctacaggttatcccaccactaaatccagagttgcttatttct
ggtgcggtggaaaccattgcagaagaagtgtctggagcctctgatatcaccaatgaagtc
gatgaagatttagaccaagaagaagaataa
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