Vibrio parahaemolyticus RIMD 2210633: VP0709
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Entry
VP0709 CDS
T00120
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP0709
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VP0709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
SpoIIID
HTH_3
HTH_IclR
HGD-D
HTH_7
AAA_18
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BAC58972
UniProt:
Q87RR8
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All DBs
Position
1:741949..742896
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AA seq
315 aa
AA seq
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MSKKLTILDIAKLAGVGKSTVSRVLTNDPKVKPQTREKVEQIIRESGYVPSKSAQSMRGG
SQKVIGVIISRLDSPSENRAVGTMLNALYSAGYDAVIMESQFDRDKTNEHLNVLKRRNVD
GVIVFGFTGCDEQALAEWGNRIVVIAMDTNNVSSINYDNQGVIDMALSHLEQQSLSRIAY
IGVDPEDKTTGLARLNAYKAWCQRKQLTPCFQTGKLSHESAYQLVDHVLKADTQAIVCAS
DTIALGVIKRLQELGREDVVVTGVGGNELLSFLFPKVFSVDPGYTLAGEKSAKMLINQLN
GDEEVVHFTQHPVCR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactcaccattcttgatatcgcgaaattggcaggcgttggcaaatcaaca
gtaagccgtgtgcttaccaacgatccaaaagtgaaacctcaaacgcgagagaaagtagag
caaatcattcgtgaatctggctatgtaccgtctaaatctgcgcaatcaatgcgtggcggt
agccaaaaagtcatcggtgttatcatctcccgtctggactcaccatccgaaaatcgtgct
gttggtacaatgctcaatgcattgtattccgctggctatgacgcagtgatcatggagagc
caatttgatcgcgacaaaaccaacgaacacctaaacgtgcttaagcgtcgcaatgtggat
ggcgtgattgtgtttggctttactgggtgtgatgagcaagccttagccgagtggggcaat
cgcattgtggtgattgcgatggataccaataacgtctcttccatcaattatgataaccaa
ggcgtgatagacatggctttgtctcatcttgaacagcaatctctctctcgcattgcttat
attggtgttgatcctgaagacaaaaccacaggcttggcgcgtttaaatgcttataaagct
tggtgtcaacgcaaacaactcacaccttgtttccaaaccggtaagcttagccatgaaagt
gcttatcagttggtggatcacgttctaaaagcagacacgcaagccattgtgtgtgccagc
gataccattgcattgggcgtaattaagcgtcttcaagagttaggccgtgaagacgtggtc
gtgacaggcgtgggtggtaacgagttgctttctttccttttccctaaagtatttagtgtt
gacccaggttatacccttgcgggtgaaaagtccgctaagatgctgattaatcaattaaat
ggcgatgaagaagtcgttcacttcactcaacatcctgtttgccgttaa
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