KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0715
Entry
VP0715            CDS       T00120                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260  Glycine, serine and threonine metabolism
vpa00460  Cyanoamino acid metabolism
vpa00630  Glyoxylate and dicarboxylate metabolism
vpa00670  One carbon pool by folate
vpa00680  Methane metabolism
vpa01100  Metabolic pathways
vpa01110  Biosynthesis of secondary metabolites
vpa01120  Microbial metabolism in diverse environments
vpa01200  Carbon metabolism
vpa01230  Biosynthesis of amino acids
vpa01240  Biosynthesis of cofactors
vpa04981  Folate transport and metabolism
Module
vpa_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VP0715
  09102 Energy metabolism
   00680 Methane metabolism
    VP0715
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VP0715
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    VP0715
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VP0715
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VP0715
Enzymes [BR:vpa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     VP0715
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1 Aminotran_5
Other DBs
NCBI-ProteinID: BAC58978
UniProt: Q87RR2
LinkDB
Position
1:749967..751217
AA seq 416 aa
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKDLANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaacccttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagcgcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcagaacagcttgctatcgat
cgtgcatgcaaactattcggttgtgagtacgcgaacgtacaacctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttcttaacccaggagatacagtactaggtatgagc
ctagcgcacggtggtcacctgactcacggttctccagtaaacttctctggtaagcattac
aacgttatcccttacggtatcgatgaagcgggtcaaatcaattacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttttctgcttactcgcaaatc
gttgattggaagcgcatgcgtgaaatcgcggacaaagtagatgcttaccttttcgttgat
atggcacacgtagctggtcttatcgcagcaggcgaatacccaacacctgttccacacgct
cacgtagtaacaacaacgacgcacaaaacactagcaggccctcgcggtggtcttatcttg
tctaatgctggcgaagatatgtacaagaagctgaactcagctgtgttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagcgatggag
ccagagttcaaagcttaccaagctcgcgtagtgaaaaacgcaaaagcaatggttggtcag
ttccaagagcgtggctacaaaatcgtatctaacggcacagaaaaccacttgttccttgtg
gatctaatcgacaaagacatcactggtaaagatgcagacgcggcactaggtgcagcaaac
atcacagtaaacaagaactcagtaccaaatgacccacgcagcccattcgtaacgtctggt
attcgtgtaggtacaccagcgatcactcgtcgtggctttactgaagaagacgcaaaagat
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
actaaacagaaagtattagaaatctgtaagcgtctaccggtttacgcctaa

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