Vibrio parahaemolyticus RIMD 2210633: VP0722
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Entry
VP0722 CDS
T00120
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00550
Peptidoglycan biosynthesis
vpa01100
Metabolic pathways
vpa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VP0722
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP0722
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
VP0722
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VP0722
Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VP0722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAC58985
UniProt:
Q87RQ5
LinkDB
All DBs
Position
1:complement(756896..758821)
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AA seq
641 aa
AA seq
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MIRRRRSQIRDYQAEARLFASRAIVAFFGIVVLMGLLVANMYNIQVNQFQDYQTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFNLELTPEKIKDIDATIQELQTILEITPEQIER
FHRERKRTRRFKSVPLLTQLNEKQVAVFSVNQYRFPGVEISATLKRYYPYGEVLTHVIGY
VSRINDRDMQRLIREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYVPPVPGKDIVLNLDINLQLYVHQLLDGRRGSAIVLDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRDLLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALQEGVITPNTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDVIKSIEESVDTFYYQIAYDLGIDRISNWMMMFGFGDYT
GIDIYEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNNGA
VSAPHLLKSTIDNGDNFEEQETSEYVTYPPIQNVPEKYWDIAKEGMRRVNHGTRGTARRS
FYNMSYQTAGKSGTAQVFGLGENEEYNADEIAEHLRDHALFTGFAPFDDPKVIVTLVLEN
AGGGSSNGGPMARKIFDRVVLGPEEIKPEDDKTNAQKEVTR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtagacgccgcagtcaaatccgagattatcaagccgaagcgcgcctattcgct
agccgcgctatcgttgcttttttcggcatcgttgttttgatgggcttgctggtcgccaat
atgtacaacattcaggtgaaccagtttcaagattatcaaacccgttcaaatgacaaccgc
atcaaagtggttcctattgcgccaaaccgcggtcttatctacgaccgaaatggtgtcctg
ttagccgaaaaccgtcctgtctttaacttggagctgactccagaaaaaatcaaagacatc
gacgctactatccaagaattgcaaaccattctggaaatcacaccagaacagatcgaacgc
ttccatcgtgagcgtaagcgtacccgtcgattcaaatccgtcccattgctaacccagctg
aacgaaaagcaggtcgcggtcttttccgtcaaccaataccgttttcctggtgttgaaatt
agtgccacactcaaacgttactacccttacggggaagtgttaacgcacgtaatcggctat
gtttctcgtatcaatgaccgcgacatgcagcgtttgattcgagaagaaaaagacgccaac
taccaagcgactcgtgacatcggtaagttgggcatcgaaaaatactacgaagatctgctg
cacggcactgctggctaccaagaagtggaagtcaacagccgaggacgcgtgattcgcacg
ttaaagtacgtaccgccagttccgggcaaagacattgtcttaaacctcgatatcaacttg
cagctttacgttcatcagcttttggatggtcgacgtggcagcgctatcgtgcttgatcct
cgtgacaatggggtgctagctatggtgtctagcccaagttacgacccgaacgcttttgtc
cacggcatttctggtaaagcctatcgcgatttgttgaacgataaaaaccgcccgttggta
aaccgcacgacgctaggtatttatccgccagcttcaacaatcaagccatttatggctgtc
gcagcgttgcaagaaggcgtaatcacgccaaatactactcgcaacgacccaggttattgg
cgcattcctaactcagacactcgtccattccgtgactggttgcgttggggacatggccgc
gtggatgtcattaaatccattgaagagtctgttgatacgttttactaccaaattgcttat
gacttggggatcgaccgaatttcaaactggatgatgatgtttggttttggtgactacaca
ggcatcgatatctacgaagaaagtaaggctaatatgccaactcgtgattggaagatgtct
cgtcacaaaacgccttggtataaaggtgacaccattcctgttggtatcggccaaggctac
tggacggcgacacctatgcaaattgcgaaagcaacatcggtgttagtgaataatggtgcg
gtttccgctcctcacctcctaaagtccaccatcgataatggtgataactttgaggaacaa
gaaacctctgaatacgtaacctacccaccgattcaaaatgtgccagaaaaatactgggat
attgcgaaagaaggtatgcgccgtgtaaaccatggtactcgtggtacggctcgtcgttct
ttctacaatatgagctaccagacagccggtaaatcaggtacagcgcaggtctttggcttg
ggcgagaacgaagagtacaacgcagatgaaatcgcggaacacttgcgtgaccacgccctg
tttacgggctttgctccgtttgacgatccaaaagttatcgttactctcgtgctagaaaac
gcaggcggtggctcaagtaacggtggtccaatggcgagaaaaatctttgaccgagtggta
cttggcccagaagaaatcaaaccagaagatgacaaaaccaacgcgcaaaaagaggttaca
cgctaa
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