Vibrio parahaemolyticus RIMD 2210633: VP0733
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Entry
VP0733 CDS
T00120
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP0733
Enzymes [BR:
vpa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VP0733
Transfer RNA biogenesis [BR:
vpa03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VP0733
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAC58996
UniProt:
Q87RP4
LinkDB
All DBs
Position
1:complement(768970..770394)
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AA seq
474 aa
AA seq
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MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSQT
DDAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDIPEQVKKE
RLYELQQTINAQAMRYSRLMLATEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKITDVFANSLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctatgagctgacggaagagccagaggaa
gcagacgtacttctacttaacacctgttcgatccgtgaaaaagcgcaagagaaagttttc
caccagctaggccgttggaaaacactaaaagataaaaaacctggcgtagttatcggtgta
ggtggttgtgtagcaacacaagaaggtgaccacatccgtgagcgtgcaccatacgttgac
gtgatctttggccctcaaactctgcaccgcctacctgagatgatcaaacaatctcaaact
gacgatgcaccggtaatggacatttcgttcccagagattgaaaagttcgaccgcctacct
gagccacgtgcagaaggtgcgacggcgtttgtttctatcatggaaggctgttcaaaatac
tgcacttactgcgttgtaccatacactcgtggtgaagaagttagtcgtccaatggatgac
gtgttattcgagattgcacagctagcggaacaaggtgtacgtgaagttaacctactaggt
caaaacgtaaacgcataccgtggccctatgcacgacggcgagatctgctcttttgctgaa
ctgcttcgtctcgttgcatctatcgatggtatcgaccgtattcgtttcacgactagccac
ccgctagagtttacagacgacatcatcgcggtttacgaagataccccggagcttgtgagt
ttcctacacctgccagtacaaagtggtagtgaccgtattctaacgatgatgaagcgtcct
cacacagctatcgagtacaagtcgatcatccgtaaactacgtaaagcgcgtcctgatatc
caaatcagttctgactttattgttggtttccctggtgaaacagacaaagacttccaagac
acaatgaagctaatcaaagacgtagactttgacatgagcttcagctttatcttctcacct
cgtccaggtacacctgcggcagattacccttgtgatataccagagcaagtgaagaaagag
cgtctatacgagctgcaacaaaccatcaatgcacaagcaatgcgttactcacgcctaatg
cttgctactgagcagcgtgtactggttgaaggcccttctaagaaaaacctaatggaactg
cgcgctcgtacagaaaacaaccgtgtagtaaactttgaaggtagcgcagacctaattggt
cagttcgttgacgtgaagattacggacgtatttgcaaactcgctacgtggtgagctagta
cgtacagaaaaagacatggaccttcgtagtgtgatttctccaacacaaatgatggcgaaa
acacgtcgcgaagatgagctaggtgtagctacttttacgccataa
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