Vibrio parahaemolyticus RIMD 2210633: VP0845
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Entry
VP0845 CDS
T00120
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00020
Citrate cycle (TCA cycle)
vpa00190
Oxidative phosphorylation
vpa00650
Butanoate metabolism
vpa00720
Other carbon fixation pathways
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
Module
vpa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpa_M00149
Succinate dehydrogenase, prokaryotes
vpa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VP0845
00650 Butanoate metabolism
VP0845
09102 Energy metabolism
00190 Oxidative phosphorylation
VP0845
00720 Other carbon fixation pathways
VP0845
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VP0845
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAC59108
UniProt:
Q87RF2
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All DBs
Position
1:874911..876677
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AA seq
588 aa
AA seq
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MSIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNS
HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELEKMGLPFSRFDNGTIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAIMGC
TAICMETGEICYFKSKATILATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQLADGSEAEVQGLYACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLAAQVEARPATESDIEASLARTMRWENSTGGEDPVQIRKDLQRCMQNSFSVFREGDAM
ATGLEELKVIRERLKDAHLADKSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDFPERDDENWLCHSIYNPETEAMTKRDVNMTPVHRDAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgtctattccagttcgtgagtttgatgccgtagtaatcggcgctggtggtgcaggtatg
cgcgctgcactacaaatttcggaacaaggcctttcttgtgctttgttgtctaaagtattc
ccaacccgttctcatactgtatctgctcaaggcggtatcacagttgcgcttggtaactcg
cataaggacgattggcaatggcacatgtacgacacagtaaaaggttctgattacattggt
gaccagaacgcgattgaatacatgtgtaaaaatggtcctgagtcagttatcgagctagaa
aaaatgggtcttccattctctcgttttgataacggtactatctaccaacgtccattcggc
ggtcagtcaaaagagtttggtggtgagcaggcggcgcgcacagcagctgcagcagaccgt
acaggtcacgctcttcttcatacgctttaccaacaaaacgtcaaacataagacaaccatc
ttttctgaatggtacgctttggatcttgtgaaaaaccaagatggcgcaatcatgggttgt
actgcgatctgtatggaaacgggtgaaatctgttacttcaaatcgaaagcaacaattcta
gctactggtggtgcaggtcgtatttacgcatcgacaactaacgcgcacatcaacacgggt
gatggcgttggtatggcacttcgtgcaggcgttccaatgcaagacatggaaatgtggcag
ttccacccaacgggtattgctggcgcgggtgttcttgtgacagaaggctgtcgtggtgaa
ggtggttaccttctaaacaaagacggcgaacgctttatggaacgttacgctccaaacgcg
aaagaccttgctggtcgtgacgttgttgctcgctctatgatgattgaaatccgtgaaggc
cgcggttgtgatggtccttggggtccacatatcaagttgaaacttgatcaccttggcaaa
gaagtacttgaatcacgtctgccaggtatctgtgaactgtctcgtacattcgcacacgtt
gatccagtgaaagaaccaattccagtaattccaacttgtcactacatgatgggtggtgtt
ccgactcaagtttctggtcaagcgattaagcaacttgcggatggcagcgaagcggaagtt
caaggtctatacgcttgtggtgaaattgcttctgtatctgtacacggtgcaaaccgtcta
ggtggtaactcactgctagacttggtggtatttggtcgtgcaacaggcctacacctaggt
gagactcttgctgctcaagttgaagctcgccctgcaactgaatcagacatcgaagcttct
ctagcgcgcactatgcgttgggaaaatagcactggtggcgaagatccagtacaaatccgt
aaagacctacaacgctgtatgcaaaacagcttctcggtattccgcgaaggtgatgcaatg
gcgacgggcctagaagagttgaaggtaattcgtgaacgtctgaaagatgctcacttagcc
gacaaatcttctgagttcaacacgcaacgtattgagtgtctagaactagataacctgatg
gaaaccgcgttctcaacagcagttgcagcaaactaccgtacagaaagccgtggtgctcat
gctcgcttcgacttccctgagcgtgatgatgagaactggctatgccactctatctacaac
ccggaaaccgaagcgatgacaaagcgtgatgtaaacatgacgccagtacaccgtgacgcg
ttcccaccgaaagtacgtacatactaa
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