Vibrio parahaemolyticus RIMD 2210633: VP0870
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Entry
VP0870 CDS
T00120
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00061
Fatty acid biosynthesis
vpa00071
Fatty acid degradation
vpa01100
Metabolic pathways
vpa01212
Fatty acid metabolism
vpa02024
Quorum sensing
vpa04146
Peroxisome
Module
vpa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VP0870
00071 Fatty acid degradation
VP0870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VP0870
09145 Cellular community - prokaryotes
02024 Quorum sensing
VP0870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpa01004
]
VP0870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpa04147
]
VP0870
Enzymes [BR:
vpa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VP0870
Lipid biosynthesis proteins [BR:
vpa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VP0870
Exosome [BR:
vpa04147
]
Exosomal proteins
Exosomal proteins of breast milk
VP0870
Exosomal proteins of breast cancer cells
VP0870
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAC59133
UniProt:
Q87RC7
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All DBs
Position
1:902659..904350
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AA seq
563 aa
AA seq
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MDKPWLSRYPSDVPETINPEQYESLVEMFEQSVQKYADQPAFMNMGSVMTFRKLEERSRA
FAAYLQNELKLQKGDRVALMMPNLLQYPVALFGILRAGCIAVNVNPLYTPRELEHQLNDS
GATTIVIVSNFANTLEQIVDNTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISMRKALRKGRRLQYVKPFMSGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPVLSPGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYQF
TAITGVNTLFNALVNNEDFHELDFSNLRLAVGGGMAVQRAVAEKWLKTTGCYLLEGYGLT
ECSPLVAAYPHDLVEYNGSIGLPVPSTEVRMVDEEGNVLPNTGTGELQVRGPQVMQGYWQ
RPEATKDTINEDGWLSTGDIVKFDDEGFLHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEEVIAHCRQHLTGYKVPKLVEFREDLPKT
NVGKILRRVLREENDAELAKKSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccatggctttcacgttatccaagtgacgtacctgaaaccatcaatccagag
caatatgagtctttggtagaaatgttcgagcagtctgtacaaaagtatgcagaccagcca
gcattcatgaacatgggctcggtgatgaccttccgcaagttggaagagcgtagccgcgca
tttgccgcttacctgcaaaacgaactgaaattgcaaaagggtgaccgtgttgctctgatg
atgccaaacctactgcaatacccagtagcgttgtttggtattttgcgtgcaggttgtatc
gctgtaaacgtaaaccctctctacactcctcgtgaacttgaacaccaattgaatgactct
ggtgccacgacgattgtgattgtgtctaactttgccaatacattagagcaaatcgtagat
aacacacccgtgaaacacgtggtgctaactagccttggccaaatgctgccacgtgcgaaa
ggtacgattgtcgatttcgtggtgaaatacgtaaaaggcatggttcctaagtacgatcta
ccgggcgcaatttcaatgcgtaaagcgctgcgcaaaggtcgtcgtctgcaatacgtgaag
ccgtttatgtctggtgatgatattgcatttctgcaatacactggtggtactacgggtgtc
gcaaaaggtgcaatcctaacgcatcgcaacatgattgcgaacgtgcttcaggcgaaaggg
gcttacggtccagtactttctccaggtcgtgaattagtggtcaccgcattgccgctttac
cacgtgttcgcactgacagtgaactgtttgctgtttatcgaaatgggcggtcgtaactta
ctgattaccaacccgcgtgatattcctggctttgtaaaagagctgcaaaaataccaattc
acagcgatcacaggtgtgaataccttattcaatgcgctagtgaacaatgaagatttccat
gagttggacttcagtaaccttcgcttggctgttggtggcggtatggcagttcaacgtgct
gttgctgagaaatggctgaagaccacaggctgctacctgcttgaaggctatggacttact
gagtgttcaccgttagttgcggcttacccgcatgacctggttgagtacaacggttctatc
ggtctgccagttccttcgacagaagttcgtatggttgatgaagaaggcaatgtactgcca
aatactggtacaggtgagctacaagttcgcggccctcaagtaatgcaaggttactggcaa
cgtccggaagcaactaaagacaccattaacgaagacggttggctatcaacgggtgacatc
gttaagtttgatgacgaaggcttcctgcatattgttgaccgtaagaaagacatgatcttg
gtttctggcttcaacgtttacccgaatgaaatcgaagacgttgtcgctctgcacggcaaa
gttcttgaagtggctgcaattggtcaaccgcatgaagtgtctggtgagttggtgaagatc
tacgttgtaaaacgtgacccgagcttaaccaaagaagaagtgattgcacactgtcgtcag
catctaacaggttacaaggttccaaaactggttgagttccgtgaagacttaccgaagacc
aacgtaggtaagatcttacgtcgtgtacttcgtgaagagaacgacgcagaactggcaaag
aaaagcgcgtaa
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