Vibrio parahaemolyticus RIMD 2210633: VP0871 Help Entry VP0871            CDS       T00120                                  Name (GenBank) ribonuclease D   KO K03684   ribonuclease D [EC:3.1.13.5] Organism vpa  Vibrio parahaemolyticus RIMD 2210633 Brite KEGG Orthology (KO) [BR:vpa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:vpa03016]     VP0871 Enzymes [BR:vpa01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.13  Exoribonucleases producing 5'-phosphomonoesters     3.1.13.5  ribonuclease D      VP0871 Transfer RNA biogenesis [BR:vpa03016]  Prokaryotic type   3'processing and CCA adding factors    3'processing factors     VP0871 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A_exo1 RNAseD_HRDC_C HRDC DUF7018 Motif Other DBs NCBI-ProteinID:  BAC59134 UniProt:  Q87RC6 LinkDB All DBs Position 1:904382..905548 Genome browser AA seq 388 aa AA seqDB search MIECQRFAGIFYSEKHVNYQIITKNKDLEQVCAQARDADVVMLDTEFVRIRTFYPQLGLI QLFDGKHLSLIDPTELTDMTSFIELLKDASVLKVLHACGEDLEVFQNAFGCTPFPMVDTQ LMAAFLGHGLSTGFATLVEEYLGVALDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYE KLLDKVTEAGWWEAVQQESDLLVSKRIRETNEENAYLDIKGAWQLKPSELAVLKPLATWR YREAIKRDLALNFIFKEGDLLTVARLGLTSFKKMEAEGMDSRAVNRHGTKIAAIVKKAKQ TPPEEYPAKIDRLMDYPGYKQVFKNMKDVVKSAAQKSGLATEFLASKKQINQLISWVWKK DRDPARLPDVMQGWRLELLGEKMNKALK NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt atgatagaatgccagcgttttgctggcattttttatagcgagaagcatgtgaattatcag attattactaaaaacaaagacctagaacaagtttgtgctcaagcaagagacgcagatgtc gtaatgctggataccgagttcgtacgtatcaggactttttatccgcaactaggtttgatt cagcttttcgacggcaagcacttgtcccttatcgatccgacagaattaacggacatgaca tctttcatcgaactattgaaagatgcatcggtacttaaagtgcttcacgcctgtggcgaa gatttagaagtattccaaaatgcatttggttgtacgccatttccaatggtcgatacacag ttaatggcggcgtttcttggccacgggctgtcaacaggttttgcaacgctggtggaagaa tacttaggtgttgcgttggacaagagtgaatctcgcaccgactggatggctcgccctctc acgcaaaagcaacttgattatgcagcggcagacgttcactacttgttgccactttacgaa aaattgctcgataaagtcactgaagctggttggtgggaagcggtgcagcaagagagcgac ttgttggtttccaaacgcattcgcgaaaccaacgaagaaaatgcgtaccttgatattaaa ggagcgtggcaacttaaaccgtcagagttagctgtgttaaagccgctagcgacttggcgt tatcgtgaagcaatcaagcgcgacttagcactaaacttcatcttcaaagagggtgatttg ctaacggttgctcgtttaggtttaacaagctttaaaaagatggaagcggaagggatggat agccgcgcggtcaatcgtcacggtactaaaattgcggccatcgtgaaaaaggctaagcaa acgccaccagaagaatacccagctaaaattgatcgcctgatggattaccctggctataag caggttttcaaaaacatgaaagatgtcgtgaaaagtgctgcgcaaaaatcagggttagcg accgagtttttagcatcgaaaaagcagattaaccagctcatcagttgggtgtggaagaag gatcgtgaccctgcgcgcttgcctgatgttatgcaaggttggcgtctagagttattgggc gaaaaaatgaataaggcgttgaaataa

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