Vibrio parahaemolyticus RIMD 2210633: VP0953
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Entry
VP0953 CDS
T00120
Name
(GenBank) conserved hypothetical protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VP0953
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VP0953
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
Phosphonate-bd
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BAC59216
UniProt:
Q87R45
LinkDB
All DBs
Position
1:993565..995568
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AA seq
667 aa
AA seq
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MITLARTLLLFACLLPSIHVKAEPSLQPHYKIATEADDVVTRVLFDAVSTEFGVSVEYIN
YASFDAILDAVANEDADFAANITYTDTRAERFSYSRPTNIEYTYLYGLSDSTLDDISRVG
VPQNTIYSELIKQYHPELKQVPYKGHNEAVRLLQTGLVDGVVDAINQLKPMLLEGFDAKM
LNDQISIKPVSIISKKGHHLEELDTFASFIHGEAVQKQLREQIALYQFELRRSALRDAIK
LLPVDLKEPIRIKMESIFPYVVYNPDGTVQGMTADIVLQSCEILDLNCVIISEPNESWES
MYRQFMKGEFDILAPLTVSRERHEFSYFPRPHYSPASVMVKRLGYKPNTYSHVSQLISER
IGVVKDDFFDQMMTQLLPLKELERFNTQHDLIEALLKGEVDYIPMDTAMLNHFLRLSELV
PIEQDTAIGEFYSSQLSIGLVANERGAMLAPYFSRAIAMLGVDKIVAQYDLRPDWRTALE
YEVRLATQTQAVFLFVLVLAICVSLYLYRQSNTDNLTGLRNRRSLQVKYRQGVNKDLAIL
YLDINHFKQINDTYGHLAGDEVLQLLSLKIHRVWSGRSYRIGGDEFILLGYPTQIELSRA
VQELSRLDVTDKLCAELKTVTISVGVSEKRKQHMSLEQALHLADEDMYVSKHSSRHYSGS
SNYLVQS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacttgctcgaacgctgctgcttttcgcttgtctgttaccaagcattcatgta
aaggccgaaccttcattacagcctcactataaaatcgcgacggaagcggatgatgttgtc
actcgcgttttatttgatgcggtatccactgaatttggtgtgagtgttgagtacatcaac
tacgcgagttttgatgccattttagatgcagtcgcgaatgaagacgcagactttgctgca
aacattacctataccgatactcgcgccgagcgtttcagctattcccgaccaacaaacatt
gaatacacatacctatatgggctgagcgactcgacattagatgacatttcgcgtgttggt
gtgcctcaaaacaccatctactcagaactgatcaaacagtatcatccagagttaaaacaa
gttccctataaaggccataacgaagcagtacgtttgctacaaactggtttagtggatggc
gtggttgatgcgatcaaccaactcaaaccaatgttgttggaagggtttgatgccaaaatg
ctcaacgatcagatctccatcaaacctgtttctatcattagtaaaaaagggcaccactta
gaagagttggatacctttgcctcgtttattcatggtgaagcggtacaaaagcaacttcgt
gagcaaatcgcgttgtatcaatttgagttgagacgttcagccctacgagatgcgatcaag
ttactgcctgtcgatttaaaagagccaattcgaatcaaaatggaatccatctttccttat
gtggtgtacaaccctgatggcaccgtacaagggatgacagccgatatagttctacaaagc
tgtgaaattctggatttaaactgtgtgatcatcagtgagcctaacgaaagttgggagtcg
atgtatcgccagtttatgaaaggtgaatttgatatattggcaccattgacggtgagcaga
gaacggcatgaattcagctatttcccaagaccgcactattcaccagcttcagtgatggtc
aagcgattgggttacaagccaaacacctattcccatgtgtcacaattgatctctgaaaga
atcggtgtagtcaaagacgatttcttcgatcaaatgatgactcagcttttaccgttgaaa
gagcttgagcgttttaacacgcagcacgatcttattgaagcattgcttaaaggggaggtg
gattacatcccgatggatacggcaatgctcaaccatttccttcgtttgagcgagcttgtg
cccatcgagcaagataccgcgataggggagttttacagttcgcagttgtctatcggtctc
gtcgcgaatgaacgcggtgcaatgttagcgccatattttagccgcgcgattgcgatgttg
ggcgttgacaaaattgtggctcaatacgatttgcgtccagactggcgcacggcgttagag
tatgaggtgcgattggcaacgcaaacccaagcggtgtttctattcgtacttgtgttggca
atttgtgtttctctctatctgtatcgtcaatccaacaccgataacttaactggattgagg
aatcgtcgctctttgcaagttaagtatcgccaaggggtgaataaggatttggcgattctt
tatttagatattaatcacttcaaacaaatcaacgatacctacggtcatttagcgggtgat
gaagtgctgcaattgctttcgctgaagatacatcgagtgtggtctgggcgaagctatcgt
attggtggtgacgaatttattttgctcggatacccaacacaaatagagctttcgcgagcc
gttcaagaactgagtcgattggatgttaccgataaattgtgcgcagagctgaaaaccgtc
acgatttcagttggtgtttctgagaaacgaaagcagcacatgagtttggaacaagcgctg
catttagcggatgaagacatgtacgtcagcaaacattcttctcgtcattattctggttct
agcaactatcttgttcagtcttaa
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