Vibrio parahaemolyticus RIMD 2210633: VP1136
Help
Entry
VP1136 CDS
T00120
Name
(GenBank) putative transcription regulator TxR
KO
K18219
sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP1136
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
Other families
VP1136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_28
HTH_23
Mg_chelatase
AAA_5
AAA
HTH_29
MCM
HTH_17
HTH_50
HTH_22
HTH_Tnp_ISL3
AAA_2
HTH_7
HTH_1
AAA_16
Mga
RWP-RK
HTH_30
HTH_Tnp_1_2
HTH_IclR
HTH_11
HTH_Tnp_1
HTH_psq
HTH_3
MarR_2
AAA_22
AbiEi_4
NUMOD1
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
BAC59399
UniProt:
Q87QL3
LinkDB
All DBs
Position
1:complement(1195273..1196229)
Genome browser
AA seq
318 aa
AA seq
DB search
MMKLRKGSTKQTVQFSEAELYPLIGNSACIHELRNAIKKYAQCDAEVLIQGETGVGKGLC
ARLIHQLSSRRSSPFVEVNCGAIPSGLIASELFGHEKGAFTGAISDRIGFIQKAHKGTLF
LDEIGDMPSDLQIHLLHFLESKQIHKVGADKFIDVDCRVIAASHVDLKSEVVQGEFREDL
FYRLNILPLTIPPLRKRGKDILMLSEHFLTDLSHGQVHNMSEEVKAKLLKHRWPGNVREL
RNVIQRAIVMCEDNTLLVADLGLENSERQLLPSVDQIDLDYLLQAIEENKHNMSAAARHL
GISRTTLYRLIKKYNINI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactgcgaaaaggtagtaccaaacaaacggtgcaattcagcgaggcggagcta
tatcctcttattgggaatagcgcttgtatccacgagcttcgaaatgccattaaaaagtac
gcgcaatgtgacgctgaagtactcatacaaggtgaaactggtgtgggtaaagggttgtgt
gctcgactgatccatcagttatctagtcgacgctcatcaccctttgtagaggttaactgc
ggtgcgattccaagtggcttgattgcttccgaactttttggccacgaaaaaggtgcattt
acaggtgccatttctgaccggattggttttattcaaaaagcacacaaaggcactttattt
ctcgatgagattggagatatgccttcggatcttcaaatacatctccttcactttttagaa
agcaaacaaatacacaaagtaggtgcggataaatttatcgatgttgattgtcgtgtgatt
gccgccagccacgtggatttaaaaagcgaagtcgtacaaggagaatttagggaggatcta
ttttatcgactcaatatattaccgctaaccattcctccacttcgaaaaagaggcaaagac
attttgatgctgtctgagcactttttaacagatttatctcatggtcaagtacacaacatg
tccgaagaagtgaaagcaaaactgcttaaacatcgttggcctggaaatgtacgtgagctg
cgtaatgtgattcagcgagcaattgtcatgtgtgaagacaataccctactcgttgctgat
ttagggcttgagaacagtgaaaggcaattactcccttctgttgatcaaattgaccttgac
tatttgttacaggccatagaagaaaataaacacaatatgagcgcagccgcacgccatcta
ggtatttctagaacaacactttatcggctgattaagaagtacaatatcaacatctga
DBGET
integrated database retrieval system
