Vibrio parahaemolyticus RIMD 2210633: VP1236
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Entry
VP1236 CDS
T00120
Name
(GenBank) conserved hypothetical protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP1236
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
Other families
VP1236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
Penicillinase_R
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
BAC59499
UniProt:
Q87QB4
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Position
1:complement(1303225..1304079)
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AA seq
284 aa
AA seq
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MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPMQVNR
AVDLLTQAKRISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSDNDVIV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLEKASSLAITLDIPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGTGFRENLKRVKDALKDSRYDKLSQY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaattcaaaaaaatctggagaatttcagtaagtcagagcgcaaa
gttgcagaagtaattatggcgtctccacaaactgcgattcattctagcattgcaacgtta
gcaaaaatggctgacgtgagtgagcccactgtaaaccgcttctgtcgccgcctggatacc
aaaggtttcccggattttaaacttcacttagctcagagccttgctaacggtacgccatat
gtaaaccgtaatgtggaagaagatgatggcccagatgcatacacgcataagattttcgaa
tcgacaatggcgtgcttggatgttgctaaaaatagcctagacccgatgcaagtaaaccgt
gcggttgacttgctgactcaagcaaaacgtatttctttctttggtcttggtgcgtcttca
tctgttgctcgcgatgctcaaaacaagttcatccgttttaatatcccaattacttgtttt
gaagatattgtcatgcaacgcatgagctgtattaactgtagcgacaacgacgtgattgtt
ctcatttctcatactggtcgcacgaaaagccaagttgaaattgcgaatctggctcgtgag
aacggtgcaactgtcatcgctatcactgcgaaagattctccattagagaaagcaagttca
ctggctatcactttagatattcctgaagatacggacgtatacatgccaatggcaagccgt
gtcgttcaaatgaccgttatcgacgtattagccacaggctttacacttcgccgtggtaca
ggtttccgcgaaaatctaaaacgcgtgaaagatgccttaaaagacagtcgttatgacaag
ctaagtcagtactaa
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