Vibrio parahaemolyticus RIMD 2210633: VP1291
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Entry
VP1291 CDS
T00120
Name
(GenBank) phenylalanyl-tRNA synthetase, beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VP1291
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpa01007
]
VP1291
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP1291
Enzymes [BR:
vpa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
VP1291
Amino acid related enzymes [BR:
vpa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
VP1291
Transfer RNA biogenesis [BR:
vpa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VP1291
Prokaryotic type
VP1291
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
BAC59554
UniProt:
Q87Q59
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All DBs
Position
1:1370544..1372949
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AA seq
801 aa
AA seq
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MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDVLPVAGSFTGVKVGHVVECGQHPDAD
KLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLPGDFKIKKAKLRGQPSHGMLC
SFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAREVG
VLNRADVTEPSVEAVAPSIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPLWMQEKLRR
CGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGSEAELNAD
TLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLHTDSSMRF
ERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTKLDNLLGHH
IADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYDNIPNQNPA
AALKMHNHVEADLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLVLPNPISAD
MSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEPMLAGVIAGTR
GEEHWDIETNTVDFFDLKGDLEAVLELSANEKAYSFAALSPESKKANPALHPGQSAAIIV
DGKEVGVIGTVHPELERKFGLNGRTIVFEIEWSAINSKVIPEAVALSKFPSNRRDIAVVV
DEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGVEEGKKSLAIALTLQSLERTLEDADI
AGAVDAIVAHVSEKFGAALRD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagcgaatcatggcttcgtgagtgggtaaaccctgcggttactactgacgag
ctaactcaccaaattacaatggccggcctagaggtagacgacgttcttcctgttgctggt
tcttttactggcgttaaagtaggtcacgttgttgaatgtggtcaacacccagatgcagac
aaactgcgcgtaactaaagttgatgttggcgaagaagagcttctagacatcgtttgtggc
gcgcacaactgtcgccaaggtctgaaagtagcagtagcaacagttggtgctgttcttcct
ggtgatttcaaaatcaaaaaagcgaaactacgtggccagccatctcacggcatgctttgt
tcattcacggaactaggtatcgacgttgagtcagacggcatcatggagctagcagaagac
gcagtaatcggtaccgatttccgtgaattcctaggtctagacgacgtaacagtagacgta
gacctaacagcaaaccgcgctgactgtttcagcattcgtggcctagctcgtgaagtcggc
gtacttaaccgcgctgacgtgactgagccatcagtagaagcggttgctccttcaatcgaa
gacaaagtgtctatcgaagtgaaagcacctgctgcgtgtccacgttacctaggtcgtgtg
gttaagaacgtaaacgttcaagctgaaacgccactatggatgcaagagaaactgcgtcgc
tgtggtatccgctctatcgatcctgtagtagacatcactaactatgttcttctagagcaa
ggccaaccaatgcacgcgttcgatctagcgaagatcgaaggtggcatcgtagttcgtatg
gcggagcaaggtgaaaagctaacacttctagacggcagcgaagcagaactaaacgcagat
acattagttgtagctgaccacaacaaagcgcttgcaatcgcaggtatctttggtggtgaa
gagtctggtgtaacaactgagactaaagacgttctacttgagtgtgcattcttcgcgcct
gaccacatccgtggtcgtgcacgtagctacggtctgcacactgattcttcaatgcgtttc
gagcgtggtgtggattacgcactacaagtgagcgcaatggagcgtgcaactcagcttcta
gttgagatctgtggtggtgaagtagcacctgttgttgcagtagagtctgaagcagaccta
cctaagccaaacaaagttgctctacgtcgtactaaactagacaacctactaggtcaccac
atcgctgatgctgacgtagtagaaatcctagagcgcctaggtttgactgttgaagcttct
gaagaaggttgggtggcagtagcgccaacatggcgtttcgatatcgctatcgagcaagac
ctgattgaagaagttggccgtatctacggttacgacaacattcctaaccaaaacccagca
gcagcacttaagatgcacaaccacgttgaagcggatcttccactgaaacgcgttcgtgat
cttcttgttgaccgtggttatcacgaagcaatcacatacagcttcgttgagcctgagcag
caaaagctagtagtacctggtgttgagcctctagtacttccaaacccaatttctgcagac
atgtcagcaatgcgtcttggtcttatccaaggtctactgaacacggttgttcacaaccag
aagcgtcaacagccacgcgttcgtctattcgaatacggcctacgtttcatcccatgtgaa
tctgcagaaaacggcatgcgccaagagcctatgctagcgggtgttatcgctggtactcgc
ggtgaagaacattgggatatcgaaactaacacggttgatttctttgaccttaaaggcgac
ctagaagcagttctagaactgtctgctaacgaaaaagcgtactctttcgcagcactgtca
cctgaaagcaaaaaagctaacccagctcttcacccaggtcaatctgcggcaatcatcgta
gatggcaaagaagtgggcgtgatcggtactgttcaccctgagcttgagcgtaagttcggt
ctaaacggtcgcactatcgtattcgaaatcgaatggtctgcaatcaacagcaaagtgatc
ccagaagcggtagcgctttctaagttcccttcaaaccgtcgtgatatcgcggtagtcgtg
gacgaagctgttgcatctggtgacatcgttaacgcttgtctagagcaaggtggcgagttc
cttaaagatgcgaagctgttcgacgtttacgtaggtaaaggcgttgaagaaggtaagaag
agcttagctatcgctctgactctacagtcacttgagcgtacgcttgaagatgcagacatc
gctggtgcggttgatgctatcgttgctcacgtatcagagaagtttggtgcagctctgcgc
gactaa
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