Vibrio parahaemolyticus RIMD 2210633: VP1345
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Entry
VP1345 CDS
T00120
Name
(GenBank) oligopeptide ABC transporter, permease protein
KO
K15582
oligopeptide transport system permease protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa02010
ABC transporters
vpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VP1345
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VP1345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP1345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP1345
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VP1345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
BAC59608
UniProt:
Q87Q05
LinkDB
All DBs
Position
1:complement(1426215..1427147)
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AA seq
310 aa
AA seq
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MFSIKKLDTQSLQDQVVDNIEAVEGRSLWQDAWARFRKNRAAMTSVYVLAFITLCITFGP
SIAAFGHDEIDWDVLADPYELGKPSLSSGHYFGTDDLGQDLFARTMQGGRLSILVGFVGA
LVAVVIGTIWGSVSGYLGGVVDSVMMRIIEVLDSVPFMFMVILFVTLFGNNIYLIFVVIG
MVSWLGIARVVRGVTFGIKKREFIEAAHSIGVSKFTIVRRHVMPNVLGIVMVYSSLMVPG
FIMFESFLSFLGLGVQPPDTSWGILISEGAKTIDVALWMLLFPSLFLVTTLFCFNFIGDG
LRDALDPKDR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgattaagaaactggatactcaatccttacaagaccaagtcgtagacaatatc
gaagcggttgaaggtcgtagtttgtggcaagacgcctgggctcgttttcgaaaaaaccgt
gccgcgatgacatcggtttatgtgctcgcgttcatcactttgtgcatcacgtttggcccc
tcgattgcggcctttggacacgatgagattgattgggacgtactcgccgacccatacgaa
ctaggaaagccatcacttagcagcggccattactttggtaccgacgatctcggccaagac
ctgtttgcccgcaccatgcaaggcggtcgcctttcgattttagttggctttgtcggcgcg
ttagtcgccgtcgttatcggaacgatttggggcagcgtttcaggctacctaggcggcgtt
gtagatagcgtgatgatgcgcatcatcgaagtattggattcagtaccatttatgttcatg
gtcatccttttcgtcaccctctttggcaacaacatctatctgatttttgtcgtaattggc
atggtgtcatggttgggaatcgctcgcgtggtacgcggcgtgaccttcgggattaaaaag
cgcgagttcatcgaagcggcacattccattggcgtgtcaaagttcaccatcgttcgtcgt
cacgtgatgccgaacgtattgggaattgtaatggtctattcatcgctcatggtgcccggc
ttcatcatgtttgaatcgttcttgagctttttaggcttaggcgtccaaccaccagacacc
agctggggaatactgatttccgaaggcgcaaaaaccattgatgttgccttgtggatgctg
ctttttccatccctgttcttggtcacaaccctattctgtttcaacttcatcggcgatggc
ttacgcgacgctcttgacccgaaagatcgataa
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