Vibrio parahaemolyticus RIMD 2210633: VP1347
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Entry
VP1347 CDS
T00120
Name
(GenBank) oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa02010
ABC transporters
vpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VP1347
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VP1347
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP1347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP1347
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VP1347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAC59610
UniProt:
Q87Q03
LinkDB
All DBs
Position
1:complement(1428244..1429854)
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AA seq
536 aa
AA seq
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MKLPKLLLLASIMSPILATPSYAVPYPAGVTLAETQEITLNNGAEVTSIDPAKQAAEPAF
NLGRDLFEGLTIQDKQGKTIPGIAKSWTVNDNNTVYTFHLRDAKWSNGDEVTAQDFVYSW
QRLLDPNTASPYAWFAAIPNILNSQAIMKGEAKPDSLGVKALDEKTFQVTLEQPIPFFIK
LLSHPVLAPVHQTTVERHGSNWTQPENIVTNGAFTVSEWKVNEKMVMKKNPHYWDANNVV
LDKITWLPIGDANVVLNRYLAGEIDQVMSIPAAQKRKLISKLPQDVADTSASLGSTFYYL
NTQEGPTKDRRVRQALSYAIDRNLLTDSILRNGGIPMFTLVPPQTDGFQSHTPEYSKWDQ
IQRIDEAKRLLAEAGYNQSNPLKLTFTVPTFSMDVKMATAMAGMWKSRLGAQVTIKQLEP
KVFYALKEPTEITRGGWTADYNEASTWLDIFVSNGEYNDSRYHNPKYDELMSKSKTMSDP
SELYLRAESMLIDDMAIIPVYRPGNDQYLIKPYVGGYERTNPESSYYRKNVYVKVH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacctaaactacttttgctagcatcgataatgagtccgatactggctacaccg
agctacgcagtgccgtatccggctggtgtgacgcttgccgagacgcaagaaattacgctc
aacaacggtgcggaagtcacctctatcgatcctgcaaaacaagccgcggaacctgcgttc
aaccttggtcgagacttgtttgaaggcttaaccattcaggacaaacaaggcaaaacgatt
cctgggattgcaaaatcttggacggtgaatgacaacaatacggtttacaccttccacttg
cgcgatgcgaaatggtcaaacggcgacgaagtgaccgctcaagattttgtctacagttgg
caacgattgctcgaccctaacacggcatcaccttacgcttggtttgccgccataccgaat
atcctaaactcgcaagccattatgaaaggcgaagcaaaacctgattcattgggcgtgaaa
gcattggatgaaaaaaccttccaagtaactttggagcaaccaattccgttcttcataaaa
ctcctgagccaccccgttcttgctccggttcatcaaacaacggtagagaggcacggcagt
aactggacacaaccagaaaacatcgtaaccaacggcgcgtttaccgtttcggagtggaag
gtaaacgagaagatggtaatgaagaaaaacccgcactattgggatgcaaacaacgtcgtc
ctagataaaatcacttggctgccgatcggtgatgcgaatgtcgtgctaaatcgctaccta
gcaggcgaaatcgatcaggtcatgtcgattcctgccgcacaaaaaaggaaactaataagc
aaactgcctcaagatgtggctgatacaagtgcttcgctaggttcgactttttactaccta
aatacgcaagaagggccgaccaaagatcgtcgagttcgccaagccctctcctacgccatt
gatcgcaatctactgactgattcgattttaagaaatggtggaattccgatgttcacgcta
gtaccaccgcaaaccgatgggtttcaatcgcacacaccggaatattcaaagtgggaccaa
atccaacgaattgacgaagcaaagcgtttgttagcagaggcaggctacaaccaaagtaac
ccacttaagttgacgtttaccgtcccgactttctcgatggatgtaaaaatggcgacagcc
atggcgggcatgtggaagagccgtttaggcgcacaagtcactatcaagcagttggaacct
aaagtcttctatgccttgaaagaacccacagaaattacgcgcggcggttggactgccgac
tacaacgaggcatcaacttggttagatatcttcgtctcaaatggcgagtacaacgattca
cgttaccacaacccgaaatacgatgagttgatgtcaaaatctaagaccatgagcgaccca
tctgagctatatctgcgagcagaaagcatgttgattgatgatatggcgatcattccagtt
taccgtcccggcaacgatcaatacctgatcaagccttatgtcggtggctacgagcgcact
aaccccgagtcctcgtactaccgcaagaatgtctatgtgaaagtccactaa
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