Vibrio parahaemolyticus RIMD 2210633: VP1408 Help Entry VP1408            CDS       T00120                                  Name (GenBank) putative IcmF-related protein   KO K11891   type VI secretion system protein ImpL Organism vpa  Vibrio parahaemolyticus RIMD 2210633 Pathway vpa03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vpa00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     VP1408  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vpa02044]     VP1408 Secretion system [BR:vpa02044]  Type VI secretion system   Imp/Vas secretion system core components    VP1408 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical Motif Other DBs NCBI-ProteinID:  BAC59671 UniProt:  Q87PU3 LinkDB All DBs Position 1:complement(1512050..1515439) Genome browser AA seq 1129 aa AA seqDB search MFKQKILRNPVVVSTIVALVLAAIFAAVYLFILEDADKLYLWVGLGVITGFYFTFQLSLW LKKKNSSKVQRLETEEEALSMVIRPLLSNAGKKPIYLMVGNKGAGRRQFLFNSSAIKPMD RSRTAKNDFFEWYESDGAVYVKPDQRLIFQEVSSSDASLWNTFIDEVIRHRPRKPFSGCL FFVDFEFMIVSEPEQKDYIMTALLQRLNSITEKTSSALPVYLMMTKLDKLDGFKEYVHSS SLKTRIEFLSIPLKEAKGVLTEYYLDSFHNLVKVLESNALDASANSTDINEKQAILAFPK QFELCQREISYVLERLCDTNNGVYSLDIREIFFCSSLQGGRKYNLLAKSCSNYFNLPIIA SEHTQLTETPYFSRFLLDSQILPESDFAGENKTYLRMIQRQSHLAMLASVVLLAGGTYFF VTTLDSNLRVINQLLNIDEKVQTEQEASFNQLLQSATRAIQPSYNAWLEGSRALDEEVIP LNISRLNESTKLAYEALIKEVAQQLMPVIEQGYRFELTHNQHDVTATLPLLKGYLMLKDP TKRDIQFLRRQTLQTLTDLSDKPDVVNQAMRYLDAYFRTQFSPVDINMDVVRATRRSLLA NSNVDLVYAGILNQADTIDLGTLDLQRAVGFEFNNVFNEPLDDNRLVIDKIYTSTGFSTF YRPRVDLMSKQVISDNWVLGLSSYVIPTKEEQESFKNQVRKKYTDDYINYWRNALSELKI QSYSNVGDLTNAIDLISGPSSPMTTVLKQVYANTQFSPVGEKNVLISKVDPKLAEVANSA SEEVEEVVQPDYLLMKRVEQAFHLLNQLQVSETPNSPTPWDETIAALSRVRTYMKDIADA PDPQMAALAAAQHRMSSSEADPLIKLKQIAQKSPEPVRSWLLDVVKQSWSVMITESAKGI QTQWYSEIYTKFKEIGLDKYPFDLTATEEISIEDFELLFASGGLLDTFIQKNFAPFYDTN LWVPKQVDGETMPLSSALLVQLRNYNVIRDTLINKSTNRVYIPFSAKVLDLDSSAIRASL KISDTDINYYHGPSRIREMEWPPQNGDFNISITIQDVTDEGKQHVLNKSGQWAIYRLLGD STLTNTHNGSFVSDIKVSGRDLSLRITPLTQKNPFTLAELYNFTLPESI NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgttcaaacaaaaaatactaagaaatccagtcgtggtttctaccatagtggctttggta ttagccgcgatatttgcagcggtatatttattcatacttgaagacgcagataagctttat ctatgggttggtttaggagttattactggtttttattttacattccagctttccctatgg cttaagaaaaaaaacagctcaaaagttcaacgtttagagacggaagaagaagctctttca atggtgatccgccctcttctttctaatgcgggcaaaaagccaatctatctgatggttggt aataaaggggccggtcgacgtcagtttttgtttaattccagcgcaattaagccgatggac cgttctcgcacagcaaaaaacgatttcttcgaatggtatgaatctgatggtgccgtttat gttaagccagatcaacgcctcatcttccaggaagtttcaagcagtgatgcttctctctgg aatacttttattgatgaggtgattcgtcatcgtccgagaaaacccttttcaggttgctta ttctttgttgatttcgaattcatgattgtatctgagccagagcagaaagattacatcatg acagcgctattgcagcgtttgaactctatcactgagaagacctcgtctgcactacctgtt tatttgatgatgacgaaactcgacaaactagatggctttaaagaatacgttcactctagt tcactaaaaacacgtattgaatttctgtccattccattgaaggaagcgaaaggtgtactt accgaatactacctagatagcttccataatctggtaaaagtgctagaaagcaacgcttta gacgcatcggcaaactcaacagatatcaacgaaaagcaagccatccttgccttcccaaaa cagtttgaactctgtcaacgtgaaatcagctacgtgcttgaacgtctttgcgatacaaac aatggcgtttactcgttggatattcgcgaaatcttcttctgttcttctttgcaaggtgga cgcaagtacaacttgttagccaaaagctgcagtaattacttcaatttaccaattatcgca tctgagcacacgcaactaactgaaacaccgtacttttctcgcttcttgcttgactctcaa atcctcccagagagtgacttcgcaggcgagaacaagacttacctacgcatgattcagcgt caaagccatttggcaatgctggcatccgttgtcttattggcaggcggtacttattttttt gtcacaacactagacagtaacttgcgtgttattaaccaattgctgaatatcgacgaaaaa gttcaaacagaacaagaagcaagcttcaaccagttattgcagagtgctactcgtgctatc caaccctcatacaatgcttggttagaaggatcacgagcattagatgaagaagtaataccg ctaaatataagcaggttaaacgaaagtacaaaattagcgtatgaagcattgattaaagag gttgctcaacaacttatgcctgttattgagcaaggctaccgttttgaactgacacacaac caacatgatgtcacagcaacgttgccgttattaaaaggctacttgatgttgaaggatccg accaagcgagatattcagtttttacgacgccaaacattgcaaacactgacagacttgagc gataagccggatgtggtaaatcaagctatgcgatacttggacgcctacttccgcactcaa ttctcacctgtagatatcaacatggatgtcgttcgagcaactcgtcgctcattgttggca aattcaaatgtggatcttgtttacgcaggcattttaaaccaagcagatactatcgatctt ggcacactcgatctacaacgtgcagttggctttgaatttaacaacgtatttaacgagccg ttagatgacaaccgactagtaatcgataagatctatacctccactggctttagtaccttc tatcgccctcgcgtcgacttgatgtctaaacaagtgatcagtgataactgggtgctagga ttgtccagctatgttatcccaaccaaagaagagcaagaatcgtttaaaaatcaagtacgt aaaaagtacaccgatgattatatcaactactggcgcaacgctctcagtgagttaaaaatt cagagttatagcaatgtgggtgatctaacaaatgctatcgacctaatctctggaccatct tcaccaatgacgactgtattaaagcaggtctatgcaaatactcagttttcaccggtagga gaaaaaaacgtactcatctcgaaagtagacccaaaactggcagaagtggcgaactctgcg tcagaagaggttgaagaagtggttcagccggattacttgttgatgaagcgtgtagaacaa gcgttccatcttctaaatcagcttcaagtaagcgagactcctaactcccctactccatgg gacgaaactatcgcagctttaagccgagttcgcacctacatgaaagatattgcggatgct cccgatccacaaatggcagcacttgcagccgctcaacaccgaatgagcagctctgaagcc gatccgctaattaaacttaaacagattgctcagaagtcaccagagccagtacgcagttgg ttacttgatgtcgtaaagcaaagctggtcggtaatgatcaccgaatcagcaaaaggcatt caaacccaatggtatagtgaaatttacaccaaatttaaagagataggacttgataaatac ccatttgatctcacagcaacagaggagatttctatcgaagacttcgaactgttgtttgct tcaggtggattgttagacacatttattcagaaaaacttcgcaccgttctacgataccaac ttgtgggtaccaaaacaggtggatggtgaaacaatgccattatcttcagccttactggtg caattgcgcaattacaacgttatccgcgacacgctgatcaataagagtactaaccgagtt tatattccattcagtgcgaaagtattagatcttgactcaagtgctatcagagccagtttg aaaatctctgacactgatatcaactactatcacggtccgagccgaattcgtgaaatggag tggccaccgcaaaacggcgacttcaacattagtatcacgatccaagatgtgacagacgaa ggtaaacaacacgttttaaataagagtggtcaatgggcgatatatagattgctaggtgat tcgaccctgacaaacactcataacggtagcttcgttagtgacataaaagtatcagggagg gatttgagcctccgtataactcccttgacacaaaaaaaccctttcactttggctgagttg tacaactttacgctcccagagtcgatttga

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