Vibrio parahaemolyticus RIMD 2210633: VP1633 Help Entry VP1633            CDS       T00120                                  Name (GenBank) putative RTX toxin Organism vpa  Vibrio parahaemolyticus RIMD 2210633 SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin_5 Big_9 Cadherin_4 CshA_repeat Cadherin_3 HemolysinCabind VWA_2 Motif Other DBs NCBI-ProteinID:  BAC59896 UniProt:  Q87P85 LinkDB All DBs Position 1:complement(1738131..1747853) Genome browser AA seq 3240 aa AA seqDB search MKFYMDRTALVSLGNQVVVIGLDGKLRVLTEGQQPRPGEVVVTSTDVGPLDLNVQLTQEQ GSKDVTDDVLQIISAIEQGEDPSAVDEEFAPAAGENGGSSLQTSATIVRDGTELLASTSF ETIGIESLGLSQTQVLALNDLFRSNLQTSADSTDKPLATTPVTLDAIEEDGGSIIITTEE LLSNVDDEDKDTLSVENLIIDKGNGTLVDNGDGTWTFTPQIDDDTEVSFTFDIIDDEDLV VSGSANLDILPINDAPNAENDVITTEEDTAVTIDVLVNDSDVEGDVLSIQSASVPSEQGS VDIVNGKLVFTPAENFNGDATITYIVTDGDLTDEAKVTVTVTPVNDSPVAVDDTTSIQED TAVTIDVLTNDTDVDGDKLSIESASVPKEQGTVEVVDGKLVFTPVENFNGHAEIIYTVTD GELTDEAKVTVTVNPVNDAPTIKVDAVESITEDAVNTDTVVATLTVRDTDTPEDQLTVSL ENNSNGYFVLVGNEVKLTQAGVDAVNNDELNLKDLTISASVSDGVNPTASDSDSLVVNRV NDAPTVENAIADQVLSEDFDAYTIDLNEVFKDSDSSLEFSVSGNNSIQISIVSGVATITP TADWNGKETITFTAKDPSGESVSQTVNFTVAPVVDIEADSADVVEDTPTIINVLGNDTFE STDKVVSLDADNGPKNGTVIVNNDGTVTYTPDDNYVGEDTFTYIVTSGGMSESTTVEVNV TPVNDAPVAKDDIATTQEDTAVTIDVLPNDTDVDGDKLSIQSATVPEAQGKVEIVDGKLV FTPAENFNGDAEITYTVTDGSLTDQATVKVTVNAVNDTPEVESNIADQTLAEDFTPYSID LNNAFSDVDGELTFSVSGNSNIQVAIVNGIATFTPTADWSGSEALTFTATDPSGESVSQT VNFTVASVADIVADKATVVEDTPTIIKVLGNDTFEGTDKVVSLDTNNGPANGTVSVNPDG SVTYTPNDNYHGTDSFTYIVTSGGVSESAIVEVNVTPANDAPVAKDDIATTQEDTAVTID VLPNDTDVDGDKLSIESVSVPKEQGTVEVVDGKLVFTPAENFNGDAEITYTVTDGALTDQ ATVKVTVNAVNDTPVVESNIADQTLAEDFTPYTIDLNTAFSDVDNVDGELTFSVSGNSNI QVAIVNGIATITPTADWNGSETLTFTATDPSGESVSQPVNFTVAPVADIVADKATVVEDT STVIKVLGNDTFEGDGKVVSLDTNNGPANGTVSVNPDGSVTYTPNDNYQGTDSFTYIVTS GGVSESTTVSVDVTPVNDAPVAKDDTAITDEDTPVTIDVLPNDNGIDGDKLSIQSASVPE AQGKVEIVDGKLVFTPAENFNGDAEITYTVTDGELTDAAKVTVTVNPVNDAPTIKVDAVE SITEDAVSTDTVVATLTVRDTDTPEDQLTVSLENNSNGYFVLVGNEVKLTQAGVDSVNND ELNLKNLTISASVSDGVNPTASDSDSLVVNRVNDAPTIKVDAVESITEDAVNTDTVVATL TVRDTDTPEDQLTVSLENNSNGYFVLVGNEVKLTQAGVDAVNNDELNLKDLTISASVSDG VNPTANDSDSLIVNRVNDAPTIKVDAVESITEDAVNTDTVVATLTVRDTDTSEDQLTVSL ENNSNGYFVLVGDEVKLTQAGVDAVNNDELNLKDLTISASVSDGVNPTANDSDSLIVNRV NDAPTVENAIADQELSEDFATYTIDLNDAFKDSDSALNFSVSGNSNVLVSIENNGIATIS PTADWNGSETLTFTATDPNGESVSQTVDFTVAPVVDIEADSTNVVEDTSTIINVLGNDTF EGKDKVVSLDAENGPKNGTVIVNNDGTVTYTPDDNYVGKDTFTYVVTSGGVSESTTVTVN VTPVNDKPESEDFTHVADDQLTQVVFDTDTKPLGSGDSKDHIADVEDDLKGNDLHVRITE LPTSGTLFFKDSDGELHEIKEVSDTLYDKDSLYYEADNVGFLLGIKDRPNTPNGSESTSD FNNWGLSEDGGPSHSRTEHLANGASITISSDSGELAQYNRQVSHIGNGIADNDGQGIEKG ETITIDLSNNPVGSVNLGLDGLGGLFDYGDDNAALITVTYLDSNNVQQTQTFEFLKPEGN FMLFQETSVGYGKDLALPEGSVITQLDFSTKNEGNWELRYVEGVPAEDSFGYVAVDSESG VSDPSTVNIVNEMLDGNVAENGPAVQSITGVTVVEGDDVTFSVSLNNATDQTVKYQVDFS AEGSSTSSQDIDLSNATFTNGVKYLGGYLIVPAGVNGFDITIPSIDDQLVESTESLVIKV GDVSGVGYIDDNDVPPTVQSNEISGLEDEAIVITLEHLGVVDSEVSVEFDTSALNGSLQV KGSDGWEVVSGSVLASDIESGLVRYVPAEHESGADVFDKDGVGNGLDTYEQIHFTVSDGN SSASGTLSIDIEPVADPIKIDLTFGPVTSVPVTLGGSWSTDEELKDLLEASNLPGLDFEH VVTQAFNNGHAGNDLMLSGDTESPLSFVGDQQAGANVDAQGSDIFVTGGGNDSIYGGIGS LDDQAETDTVVYSGKLSDYDFSYYPASDHSEVPYWIVEDSRFIDTKDVVSSTHKESGDHL YEIEQLIFQDAIIKLDNNTGEYVVLTEQQVSFELNLDLIDVDGSESFINDSVTLTGIPSG LTLEVNGKTVTENSDGSYTVDLSSEPNQTSHQLSGTITVPADYNGSLDFDVTATAGSVEV NNNTQMGADTASVSVRDYEFVSGTHGDNNIVGSDDNDVIVGDVQGLQIVEGQDYNIAFML DTSGSMGYDVGRAVTELKTVLNTLIESASGPHSGKVNVLLTTFSTESKQVLELDLSSDNA KSQVESILDAIVKLGDGNTNYEAGFQSALNWFENADSGATNLSYFISDGRPNQATDNNVN WYSSKESVVLGVSEQQLVTLADVLPSDYRFGDTVTYNNKTVIDFRGTVYSLSTGEKMGRM LNSYEYDDYGNNVLEQANNAYSALAEFSEVRSIGIGGHLNEDSLKHFDSDGVVRTNIDVN QLAEVILGKEVSLMQGKDEISSLDGNDIIFGDAIRFDINGEQGVSALQNYVASQLGKDVA LVTKEEVHHYITENQAEFEQSRYYDQADTIYGGAGNDILFGQGGNDKLFGGADNDILIGG LGSDILTGGDGEDIFKWIDVANERDTVTDFSSSEDSLDFSDLFDDLSKDEVGDLLSDLQS GSHTGDAGGYHVEVSQDGSTDTNLSITKGSSTLDIHFNSASVDDITQHLIASLDSQYKDM NT seq 9723 nt NT seq  +upstreamnt  +downstreamnt gtgaagttttatatggatcgtacagcgttagtttcactcggcaatcaagtcgttgtaata ggattagatgggaagctgagagtactaacggagggacaacagccacgaccaggagaagtg gttgtgacatcaacagatgttggccctctggatttaaacgtgcaattgactcaagagcag ggttctaaagatgtcactgatgatgttttacaaattattagtgcaatcgaacaaggagaa gacccttctgctgtagatgaagagtttgcgccagcagctggtgagaacggcggctctagt ctgcaaaccagtgcgacaattgttcgcgatggtactgaactcttggcatccaccagtttt gaaaccattggtattgagtctctaggactatcgcaaacacaagttctagcactgaacgat ctattccgaagtaatcttcaaacgagtgctgacagcactgataaacctttggcaacaacg ccagttactcttgatgcgattgaagaggacggtggttcaatcatcattacgacggaagag ttactgtcaaatgttgatgatgaagacaaagacacattatctgttgagaacctcattatc gataaagggaatggcactcttgtcgacaatggtgatggcacgtggactttcactccgcaa atcgatgatgacacagaagtctctttcactttcgacattattgatgacgaagacctagtg gtatctggttctgcaaatctcgatattctgcctatcaatgatgcgccaaacgcagaaaat gatgtaattacgacagaagaagacaccgctgttacgattgatgttttagtcaatgatagt gatgttgaaggtgacgtactcagtattcaatcagcatcagttccttcagagcaaggctca gttgacattgtcaacggcaaactggtgttcacgccagctgagaacttcaacggtgacgca accatcacttatatcgtaactgatggcgatttgacggacgaagcgaaagtgactgttacg gttacgcctgtaaatgacagtcctgttgccgttgatgacaccacatctatacaagaagac accgcagttaccattgatgtactgactaacgacaccgacgtggatggcgataagctgagt attgaatcagcctctgttcctaaggagcagggtacggttgaagtggtggatggcaaactt gttttcacaccggtagaaaacttcaatggccacgctgaaatcatctacaccgtaacggac ggtgaattgaccgacgaagcgaaagtaactgttacagtaaatccagtaaacgatgcgcca accatcaaggttgatgcagtagaaagcatcactgaagatgcagtgaacactgatacggta gtcgcaaccttaacggttcgcgataccgacacgcctgaagaccaattaaccgtttcttta gaaaacaactcaaacggctacttcgtgttggttggcaatgaagtcaagctgactcaagca ggcgttgatgcagttaataatgatgaacttaaccttaaagacctaactattagcgcgtca gtatcggatggtgttaatccaacggctagcgacagtgacagtttggttgtgaatcgtgtt aacgatgcaccgactgttgaaaatgccattgcagaccaagtgttatcggaggatttcgat gcatacacgatcgacttgaatgaagtattcaaagattctgattcctcgctagaattctca gtttctggcaataacagcatccaaatctctattgtgagtggcgttgctaccatcactccg actgcggattggaatggcaaagagacaattacgttcacagctaaagacccaagcggcgag agcgttagccaaacggtgaacttcacggttgcaccagtagtcgacatcgaggctgatagc gcggatgtagtcgaagacacaccaaccatcattaacgtcttaggtaacgacacgtttgaa agcactgataaagtggtgtctttggatgctgataatggtcctaaaaatggcaccgtcatc gtaaacaacgatggtacggtgacctacacaccagatgacaactacgtcggtgaagatact ttcacctacatcgtcacctctggcggtatgtctgaatccactaccgttgaagtcaatgta acaccagtcaacgatgcgccagtggcgaaagacgatatcgctacgacacaagaagacacc gcagttactatcgatgttttgccaaacgatactgatgtggatggcgacaagttgtcgatc caatctgcgactgttcctgaagcacaaggtaaagtagagatcgttgatggcaaactcgtc ttcactccggcagaaaacttcaatggtgacgctgaaatcacttacaccgttactgatggt tctctaactgaccaagcgacggtcaaagtcacggtgaatgcggtgaacgacacgcctgag gttgaaagcaacatcgcagatcaaaccttggcggaagactttaccccatactccatcgat ctgaataacgccttcagcgatgtggatggcgagttaacgtttagcgtctcaggtaatagc aacattcaagtggcgatcgtcaacggtattgctacgttcactccaaccgcagactggagc ggctcagaagcgttgacctttactgctaccgatccaagcggcgaaagcgttagccaaacg gtgaacttcacggttgcgtctgtggcggacatcgtggcagacaaagcgacggttgtggaa gacacgccgaccatcatcaaggtcttaggtaacgacacgttcgaaggtactgacaaagtg gtgtcgctagataccaataacggcccagccaacggcacggtctcggtcaaccctgacggc agcgtgacttacacgccaaacgacaactaccacggtacagacagtttcacctatattgtc acgtcaggcggtgtgtctgaatccgctatcgttgaagtcaatgtaacaccggccaacgat gcgccagtggcgaaagatgacatcgctacgacacaagaagacactgcagttactattgat gttctgccaaacgatactgatgtggatggcgataagctgagtattgaatcagtctctgtt cctaaagagcagggtacggttgaagtggtggatggcaaacttgttttcacaccggcagaa aacttcaatggcgacgccgaaatcacttacaccgtcaccgacggcgcactgactgaccaa gcaacggtcaaagtaaccgtgaatgctgtaaacgacacgcctgtggttgaaagcaacatc gcagatcaaaccttggcagaagacttcacgccatacactatcgatctgaataccgccttc agtgatgtggataacgttgatggcgagttaacgtttagcgtctctggcaacagcaacatc caagtggcgatcgtcaatggcattgccacgatcactccaaccgcagactggaacggctca gagaccctaacctttactgccactgatccaagcggcgaaagcgttagccaaccggtgaac ttcacggttgcgcctgtggcggacattgtggcagacaaagcgacggttgtggaagacact tcaaccgtcattaaggtcttaggtaacgacacgttcgaaggcgacggtaaagtggtgtcg ctagataccaataacggcccagccaacggcacggtctcggtcaatcctgacggcagcgtg acttacacgccaaacgacaactaccaaggtacagacagcttcacctacattgtcacgtca ggcggggtatcggaatccaccacggtgagcgtcgatgtgacgccagtgaatgatgcacca gtggcaaaagatgacacggcgattactgacgaagacacaccagtgacgattgatgtcctg ccaaacgacaacggcatcgatggcgataagttgtcgatccaatctgcgtctgttcctgaa gcacaaggtaaagtcgagatcgttgatggcaaactggtgttcacaccggccgaaaacttc aatggtgacgctgaaataacttataccgtaacggacggtgaattgaccgacgcagcgaaa gtaactgttacagtaaatccagtgaacgatgcgccaaccatcaaggttgatgcagtagag agcatcactgaagatgcagtgagcactgatacggtagtcgcaaccttaacggttcgcgat actgacacgcctgaagaccaattaaccgtttctttagaaaacaactcaaacggctacttc gtgttggttggcaatgaggtcaagctgactcaagcgggtgttgactcggttaacaacgat gaactcaaccttaaaaacctaactattagcgcgtcagtatcggatggtgttaatccaacg gctagcgacagtgacagtttggttgtgaatcgtgttaacgatgcgccaaccatcaaggtt gatgcagtagaaagcatcactgaagatgcagtgaacactgatacggtagtcgcaacctta acggttcgcgatactgacacgcctgaagaccaattaaccgtttctttagaaaacaactca aacggctacttcgtgttggttggcaatgaagtcaagctgactcaagcaggcgttgatgca gttaataatgatgaacttaaccttaaagacctaactattagcgcgtcagtatcggatggt gtaaatccaacagctaacgacagtgacagtttgattgtgaatcgtgttaacgatgcgcca accatcaaggttgatgcagtagaaagcatcactgaagatgcagtgaacactgatacggta gtcgcaaccttaacggttcgcgatactgacacttctgaagatcaattaaccgtttcttta gaaaacaactcaaacggttactttgtgttagttggcgatgaagtcaagctgactcaagcg ggcgtcgatgcagttaacaacgatgagctcaaccttaaagacctaactatcagcgcgtca gtgtcggatggtgtaaatccaacagctaacgacagtgacagtttgattgtgaatcgtgtt aacgatgcaccgactgttgaaaatgccattgcagatcaagagttatcggaagactttgcg acctacacgattgatttaaacgacgcatttaaagatagcgactcagcgctaaacttctca gtgtctggcaatagcaacgtgttggtttcgattgaaaataatggcatcgcgaccatttca ccaacagcagactggaacggctcagaaaccttaacgtttactgctaccgacccaaatggt gaaagtgttagccaaacggtggactttacggttgcaccagtagtcgacatcgaggctgac agcacgaatgtagtcgaagacacatcaactatcattaacgtcttaggtaacgacacgttt gaaggcaaagataaagtggtgtctctggacgctgagaatggtcctaaaaatggtaccgtc atcgtaaacaacgatggtacggtgacctacacaccagatgataactacgtcggtaaagat actttcacttatgtcgtgacatcaggcggtgtgtctgaatccaccaccgtcacggtcaat gtgacaccagtaaacgacaagcctgaaagtgaagactttacgcatgtcgccgatgatcag cttacgcaagttgtgtttgataccgatacgaaacctctgggtagcggtgactctaaggat catatcgcggatgttgaagacgacttaaaaggcaatgatctacatgtccggattactgaa ctgccaacatcaggtacgttgttctttaaagatagtgacggtgagttgcacgaaattaaa gaagtaagcgatacgctttatgacaaagacagtctttactatgaagctgacaatgttggc ttcttattaggtatcaaagatcgtccaaatacgcctaatggctcagaatctacatcagat ttcaataactggggattaagtgaggatggtggaccatcacattcccgtactgagcattta gcaaatggagcctctatcactatttcttctgatagcggtgaacttgcgcaatacaaccgt caggtgtcacacatcggcaatggtatcgctgacaatgacgggcagggtattgagaagggt gaaacgattacgatcgatttgtctaataatcctgttggctccgtaaaccttggtctagat ggattaggtggattgtttgattacggtgatgacaacgcagcgcttattacggttacatac ttagattcaaataatgtccaacagactcaaacgttcgagtttttgaagcctgaaggcaac ttcatgctattccaagaaacaagcgttggttatgggaaagatctagctcttcctgaaggt tcggtcattactcagttagatttttctacgaaaaatgaaggtaactgggagttacgttat gtagaaggtgttcctgccgaagacagctttggatatgtggcagtcgactctgaaagtggc gttagcgatccatctacagtcaatatcgttaacgaaatgctagatggtaatgttgcggaa aatggacctgctgtgcagagcattacaggtgttacggttgttgaaggtgacgatgtcacg ttttctgtttctctaaataatgcaacagatcagaccgttaagtatcaagtggatttctct gcagaggggtctagtacgagctctcaagacattgatttgtcgaacgcaacttttactaat ggcgtgaagtatttgggcggataccttattgttccagccggtgtgaatggctttgatatt accattccaagcattgatgatcagttggttgaatcaacagaaagccttgtgattaaagtc ggagatgtatctggcgttggctatattgatgataatgatgttccgccaacggttcaaagc aacgaaatttccggattagaagacgaagcgattgttatcacactagaacatttaggcgtc gttgacagtgaggtaagtgttgagtttgacacttctgctctaaatggctcactacaagtg aaaggttctgatggttgggaagtggtttctggcagtgtactcgcttctgatatcgaaagt ggtcttgttcgctatgttcctgctgaacatgaatctggtgcagatgttttcgataaagac ggtgttgggaacggcttggatacttacgagcagattcatttcactgttagtgatggcaat tcttctgcttcaggtacgttgagtatcgacatagagcctgtagcggacccaattaagatt gaccttactttcggtccagtaacgtctgtacctgtgacattaggcggaagctggtctaca gacgaggaacttaaagatctgcttgaggcaagcaatttaccagggcttgactttgaacat gtggtgacacaagcgtttaataatggtcatgctggtaacgacttaatgttaagcggagac actgaatcaccactgagttttgtaggtgatcaacaagcaggtgccaacgttgatgctcaa ggtagtgatatctttgtgactggaggaggtaatgattctatctatggcggtattggttca ttagatgatcaagctgagactgacacagttgtttactctggtaagttgtctgattacgac ttcagctattacccagcatctgaccactcagaagtcccgtattggattgtcgaagatagt cgatttattgatacaaaagatgttgtttcgagcactcataaagagtctggtgaccacctt tatgaaattgaacagcttatcttccaagatgccattatcaagctagataacaacacagga gagtatgttgttcttacagaacaacaagtctcttttgagctgaaccttgatcttatcgat gtggatggcagtgagtcattcattaacgatagcgtcaccttaacgggaatcccttcaggg ctaacattagaggtgaatggcaaaacggttactgaaaacagcgatggttcttacacggtt gacctttcaagtgaaccaaatcaaaccagccatcaactaagcggtacgattactgtacca gcagattacaatggctcgttagattttgatgtaacagcgacggcaggaagtgttgaagtt aataacaatactcaaatgggagcggacacggcttctgtttcagtccgtgattatgagttt gtttctggtacgcatggtgataacaacatagttgggtccgatgataacgacgtgatcgtt ggtgatgttcaagggttacaaattgtcgaaggtcaagattacaacattgcctttatgctc gatacgtctggcagtatgggttacgacgttggccgtgcggtaactgaactaaaaacagtg ctgaatactctgatcgaaagtgcgagtggacctcattcgggcaaagtgaacgttttatta accacgttttccactgagagcaaacaggtgctcgaattggatttgagctctgacaatgct aagtctcaagtagaatcaatattggacgcaattgtgaagctcggtgacggtaacacaaac tatgaagcaggcttccaatcagcattgaactggtttgagaatgctgatagtggcgcaacg aatttaagctatttcatttctgatggtcgtccaaaccaagctacagacaacaatgtgaat tggtatagcagtaaagagagtgttgtacttggcgtatcagagcagcagttagtgaccttg gctgatgtcttgccaagtgattatagatttggcgatacagttacatacaacaataaaaca gtcatagatttccgtggaacagtatattccctttctactggtgaaaagatgggtaggatg ctgaattcttacgaatatgacgactatgggaacaacgttcttgagcaagcaaataacgca tatagcgcattggcagaatttagcgaagtacgctcaataggtattggcggtcatctgaat gaagattcgttgaaacactttgactctgatggtgttgtaagaactaacatcgatgttaat caacttgcagaagtgattcttggcaaagaagtgtcattaatgcaaggcaaggatgagatt agtagccttgatggaaacgacatcatttttggtgatgcgattcgttttgatatcaatgga gagcaaggtgtttctgcactacaaaactatgtagcttctcaactggggaaagatgttgct ctggtaacgaaggaggaagttcatcactacattactgaaaaccaagctgagtttgagcaa tctcgttattatgaccaagcggacaccatttatggtggtgcaggaaatgacatcttgttt gggcaaggtggaaacgacaagctgttcggtggcgcagataatgacattttgattggtggt ttaggcagcgacattctgactggcggtgatggtgaggacatcttcaaatggatcgatgtg gccaacgaacgcgacactgtcacagatttttctagcagtgaagactctctagacttctcc gatctgtttgatgatttatcgaaagatgaagtaggcgatctgttaagtgatttacaatca ggtagtcatacaggagacgctggcggctatcatgttgaagtaagtcaagatggcagcact gatacgaatttgagtattactaaaggtagctcaacattagatatccacttcaatagcgcg agcgtggatgatatcacacagcatttgattgcgagtctcgattctcaatacaaagacatg tag

DBGET integrated database retrieval system