KEGG   Vibrio parahaemolyticus RIMD 2210633: VP1696
Entry
VP1696            CDS       T00120                                 
Name
(GenBank) putative type III secretion protein YscC
  KO
K03219  type III secretion protein C
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VP1696
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP1696
Secretion system [BR:vpa02044]
 Type III secretion system
  Type III secretion core apparatus
   VP1696
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 FecR_C
Other DBs
NCBI-ProteinID: BAC59959
UniProt: Q87P22
LinkDB
Position
1:complement(1806256..1808154)
AA seq 632 aa
MVTVMRTLMPKIGRIAAKMTLCALCVAPMFSVQATELNWPEQPFRYYADNDSLKDLLNNF
GANYRVSVSVSDKVNDRVSGRFTPEDPAEFLDYLAQVYNLMWYFDGAVLHVYKATETRSR
LLQLELLTARELRSTLISTGVWDARYGWRAAENKGLVYLAGPPRYVELVVQTAEALESRL
LQKSNSTDELFVELIPLKYASATDRSISYRDQSITVPGIASVLSRVVGGVQTQITDSASV
QTSSVNGLPAEAAKPRGKTASVHGGATVEAEPGLNAIIVRDTQARLPLYRKLVAQLDQPQ
SRIEVALSIVDISANDLRQLGVDWRAGVSVGNNRIVDIKTTGDVDNGDVTLGSGQSFKSL
LDSTNLNYLLAQIRLLESKGSAQVVSRPTLLTQENVEAVLNNSSTFYVKLVGKETAALEE
VTYGTLLRIVPRIVGDRFATRPEINLSLHLEDGAKIPDGGVDDLPSVRKTEISTLATVKQ
GQSLLIGGVYRDEVSHQLRKVPLLGDIPYLGALFRSNTNTTRRTVRMFIIEPRIVVDGIG
DSVLIGNEHDLRPSIGQLNNISNNSAEFKSVVEVFSCTSKTQAERYQQDLLSQQKSSLLT
QCQLPSGQVGWRVKVAECDLSQAECVRPSEEP
NT seq 1899 nt   +upstreamnt  +downstreamnt
gtggttaccgtaatgcgaactctcatgccaaaaatagggcgcattgccgccaaaatgaca
ttgtgcgcactgtgtgtcgctccgatgttttctgtacaagcgacagagctcaattggcca
gaacaaccgtttcgttactatgccgataacgattcgctgaaagatctgcttaacaacttt
ggtgccaactatcgagtatccgtgtctgtgagcgacaaagtgaatgaccgagtgagtggt
cgattcacgccagaagatccagcggaatttctcgactacctagcgcaagtttacaacttg
atgtggtacttcgatggcgcagtactgcacgtttacaaagcgacagaaacgcgctcccga
ttgctgcaattggaactgcttaccgcgcgcgagcttcgcagtaccttgatttcaaccggt
gtttgggatgctcgttatggttggcgcgctgccgaaaataaagggctggtatatctagct
gggccgccgcgttacgttgagttggtggtgcaaaccgcagaagcgttagagagccgattg
ctgcaaaagtccaactcgacggatgagctgtttgtggaactcattccgcttaaatatgcc
tcggcgacggacagaagtatctcgtatcgcgaccaaagcattaccgttccggggattgct
tcggtattgagccgtgtggttggcggtgttcaaactcaaattacggattctgcgtctgta
caaacatcgtctgtaaatggattacccgcagaagcagcgaaacctcgtggcaaaactgcg
tctgtgcacggcggtgcaaccgtagaagcggagccggggctgaatgcgatcatcgttcgc
gatacccaagcaagactgccgttgtatcgcaagctggtcgctcaactcgatcagccacaa
tctcgtatcgaggttgcgttatctattgtggacatcagcgcaaacgatttacgtcagctc
ggtgtggattggcgtgcaggtgtatcggttggaaacaaccgcattgtcgacatcaaaaca
accggcgacgttgataacggtgatgtcacattgggcagtggtcagagtttcaagtccttg
ttggattcgaccaacttgaactacttgttggcgcaaattcgtttattggaatcgaaaggc
agtgcgcaagtcgtttccagaccaacgctgctcacgcaagaaaacgtcgaagcggtgcta
aacaacagcagcacgttttacgtcaaattggttggcaaagagacggcggctttggaagaa
gtgacgtatggcaccttgttgcgtattgtgcctcgtatcgtcggcgacagattcgcgacg
cgaccagagatcaacttgagccttcacttagaagatggcgcaaagatcccagatggtggt
gtggatgatcttccatcagtacgtaaaaccgaaatcagtacgttagcgacggtaaaacaa
gggcaaagcttactcattggtggcgtataccgagacgaagttagccatcagctacgtaaa
gtcccgctgttgggcgacattccgtacctaggtgctttgttccgtagtaataccaacaca
acgcgccgaacagttcgcatgttcattatcgagccgagaatcgtggtcgatgggattggc
gacagcgtgttgataggtaatgagcatgatttgcgcccgagtattggccagctcaacaac
atttcgaacaacagcgcagaatttaaatcggttgttgaagtattcagctgtacgtcaaaa
acgcaggcagaacgttaccaacaagacttactgtcacagcaaaagtcttcgctgctaact
caatgtcaattgccgtcagggcaagtaggctggcgagtcaaagtggcggaatgtgacctt
tcacaggccgaatgtgttcgcccttcagaggagccataa

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