Vibrio parahaemolyticus RIMD 2210633: VP1778
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Entry
VP1778 CDS
T00120
Name
(GenBank) putative transcriptional regulator
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP1778
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
Other families
VP1778
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Paralog
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GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_19
HTH_26
HTH_37
Sigma70_r4
MqsA_antitoxin
AraC_binding
MarR_2
MPI_cupin_dom
HTH_92
HTH_24
HTH_25
AraC_binding_2
Ribosom_S30AE_C
Ectoine_synth
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAC60041
UniProt:
Q87NU0
LinkDB
All DBs
Position
1:complement(1894516..1895073)
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AA seq
185 aa
AA seq
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MDNHEIGKNIVQLRKKHGLSQRELAERAGITHSAISSIENGKVSPSVSSLQKIVNVFSLS
LSEFFIFEQSSNDEVKVVFKPSDLVEIGSETVSMKLVTNGDKDQVIGFLIEEYAPHGTTG
AAEIRHEGEEVGTILEGEITLEYKGHSYVLTAGESYIIDTTKPHRFTNHTDKACRLISAH
TPTTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcatgagattggtaaaaatattgttcagttacgtaaaaaacatggattgtca
caaagggaattagccgaacgcgctggtattacccacagtgcaatctcgtccattgaaaat
ggcaaagtgagcccgtcggtcagctcattacaaaaaatcgtcaatgtattttctttatca
ctgtcggagtttttcatttttgaacaatcttcgaatgatgaagtgaaagtggtcttcaaa
ccgtcagatctcgtggaaattgggagcgagacggtatccatgaaactagtgacgaatggc
gacaaagatcaagttattggattcttgatcgaagaatacgcaccacatggaacaacaggt
gcggcggaaattagacacgaaggcgaagaggtcggcacgattttagagggagaaatcact
ctagagtacaaaggccactcctacgtcctcacagccggcgagtcgtacattattgatacg
acgaagccacatcgatttacgaatcacacagacaaggcttgtcgattgataagtgcgcat
acgccaaccacattttag
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