Vibrio parahaemolyticus RIMD 2210633: VP1871
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Entry
VP1871 CDS
T00120
Name
(GenBank) hypothetical protein YcjX
KO
K06918
uncharacterized protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
VP1871
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Gene cluster
GFIT
Motif
Pfam:
DUF463
Retrotran_gag_3
DO-GTPase2
Luciferase_cat
Motif
Other DBs
NCBI-ProteinID:
BAC60134
UniProt:
Q87NJ7
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All DBs
Position
1:complement(1953672..1955048)
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AA seq
458 aa
AA seq
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MKRIKQEVNDFISRGMDSNVRIAVTGLSRAGKTAFITSLVNQLLHTATHDNLPLLTAARD
KRLIGAKREPQTNMMVPRFAYDEAMSQIHANPPQWPVPTRDVSEIRLALKYKPKKTTKKL
LSKTAVLNVDIIDYPGEWLLDLPLLDMNFSSWSQTQFDALKGKRKELAQAWLAELEQIEL
NADADEKQLEKVAHAYTDYLHACKDAGLHWVQPGRFVLPGELAGAPVLQFFPCRFESESK
APKGSNLAMLEARFHEYQQKVVKAFYKHHFATFDRQIVLVDCLQPLNAGDEAFYDMRQAL
EQIMHSFRYGRSSFLRRLFSPKIDKVLFAATKADHVTPDQHPHLVSLLQQMVHPAWQTAA
YENIEMSCMSIASIQATTSGFITSGDKTISALQGTTLNGEAMTMFPGEVPKKLPNAAYWQ
NSGFDFTSFRPMPSASDEPMKHIRLDKALDYLLGDKLK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataaagcaagaagtgaacgactttatcagccgtggtatggattctaatgta
agaattgcggtaactgggttatcccgagcgggtaaaacggcctttatcacgtctttggtt
aatcagttgcttcacaccgccactcacgacaatctacctttattgaccgccgcgagagac
aaacgccttattggtgcaaagcgtgaacctcaaaccaatatgatggtgcctcgctttgct
tacgacgaggcgatgagccagattcatgcgaacccaccacaatggccagtgccaacgcgt
gatgtgagcgaaattcgcctagctttaaaatacaaaccaaagaaaacgaccaagaagctg
ctcagtaaaacggcggttctcaatgttgacatcatcgactatccgggtgaatggctattg
gacttgcctttgctcgatatgaatttttcgagttggtctcaaacgcagtttgacgcgctg
aaaggcaaacgcaaagagttagctcaagcatggctagctgaactcgaacagatcgagctc
aatgcggatgcagatgaaaaacagctagagaaagtggctcacgcctacacggattatctc
catgcttgtaaagatgctgggctgcactgggttcagccaggacgatttgtgttaccagga
gagcttgctggtgcaccggtgttgcagttctttccttgtcgatttgaatcggaaagcaaa
gcgccaaaaggcagcaacttagccatgttagaagcgcgttttcatgaatatcagcagaaa
gtagtgaaagcgttttataagcaccattttgcaacatttgaccgccaaattgtgctggtg
gattgtttacagccacttaatgctggcgacgaggcgttttatgatatgcgtcaggctctt
gagcagatcatgcacagctttcgttatggtcgcagtagctttttacgtcgtttgttctcg
ccaaaaatagacaaagtgctatttgccgccaccaaggccgatcacgtgacaccagatcag
catccgcaccttgtctctctactgcaacaaatggtgcacccagcatggcaaaccgctgct
tatgagaacattgaaatgagttgtatgagcattgcttccatccaagcgaccacttctggg
tttattacctcaggcgacaaaaccatttctgcgttacaagggacgaccttaaacggtgag
gcaatgacgatgttcccaggagaggtgccgaagaagctacccaatgctgcctattggcaa
aacagtggtttcgactttacttccttccgtcctatgccgtcagcaagtgatgaaccgatg
aaacacatacgtctagataaagcactggattatctgctaggagacaaattgaaatga
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