Vibrio parahaemolyticus RIMD 2210633: VP1880
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Entry
VP1880 CDS
T00120
Name
(GenBank) L-serine dehydratase 1
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260
Glycine, serine and threonine metabolism
vpa00270
Cysteine and methionine metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01200
Carbon metabolism
vpa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VP1880
00270 Cysteine and methionine metabolism
VP1880
Enzymes [BR:
vpa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
VP1880
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Gene cluster
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Motif
Pfam:
SDH_alpha
SDH_beta
MmgE_PrpD_N
Motif
Other DBs
NCBI-ProteinID:
BAC60143
UniProt:
Q87NI8
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All DBs
Position
1:1963738..1965099
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AA seq
453 aa
AA seq
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MISVFDIYKIGVGPSSSHTVGPMKAGKEFIDDLRAMGKLRDITKITVDVYGSLSLTGKGH
HTDIAIIMGLAGNSPEKVDIDSIPGFIARVEETERLPVGMHCHTVSFPREGGMNFHKTNL
ELHENGMQIHAWIDDEKVYSKTYYSIGGGFIVDEENFGKEAENPIKVPYEFTTAEELVNQ
CKESGLSISALVMKNEQALHSDEETRTYFANIWRTMRECMDRGMNEEGILPGPLRVPRRA
AALRQQLLTSEKTTNDPMSVVDWVNMFAFAVNEENAAGGRVVTAPTNGACGIIPAVLAYY
DKFIQTVTEKDYIRYFAASGAIGGLYKRNASISGAEVGCQGEVGVACSMAAAGLAELMGG
SPEQVCMAAEIAMEHNLGLTCDPVAGQVQVPCIERNGIAAVKAINSTRMALRRSSAPTVS
LDKVIETMLETGKDMNAKYRETSQGGLAIKVIC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgtttttgatatctataaaatcggtgttggtccttcaagctcacacactgta
ggcccaatgaaagcgggtaaagagtttattgatgatcttcgtgcaatgggaaaactgcgc
gacatcactaaaatcaccgttgacgtttatggatcactatcactgacagggaaaggtcac
cacacagatattgctatcatcatgggtcttgcgggcaactcccctgagaaagttgatatc
gattctattccgggcttcatcgctcgcgtagaagaaactgagcgccttcctgttggcatg
cactgtcatacagtatcgttcccacgtgaaggtggaatgaacttccacaaaacgaacctt
gagctacacgaaaacggcatgcaaatccacgcttggattgatgacgaaaaagtgtactca
aaaacttactactctatcggtggtggcttcatcgttgatgaagagaacttcggtaaagaa
gctgagaacccaatcaaggttccttacgagttcacaacagctgaagagctggttaaccag
tgtaaagaaagcggtctttctatcagcgcgctagtgatgaagaacgaacaagcacttcac
tcagacgaagaaactcgtacttacttcgcgaacatctggcgcacgatgcgcgaatgtatg
gatcgcggtatgaacgaagaaggcattctgcctggtccactacgtgtacctcgccgcgca
gctgcacttcgtcaacaactgcttacttcagaaaaaaccaccaacgacccaatgtctgtt
gttgactgggtaaacatgttcgctttcgcagtaaacgaagagaacgcagccggtggccgt
gttgttaccgcaccgactaacggcgcttgtggcatcatccctgcggtactggcttactac
gataagttcatccaaactgtgactgaaaaagattacatccgttactttgctgcttctggt
gcaattggtggtctttacaagcgcaacgcgtcaatctctggtgcagaggttggctgtcag
ggtgaagttggtgtggcatgttctatggcggcggctggtcttgcagagcttatgggtggt
agcccagagcaagtatgtatggcagcagaaatcgcgatggagcacaacctaggtctaact
tgtgacccagttgcaggtcaggttcaagttccatgtatcgagcgtaacggtatcgcagct
gtaaaagcgatcaactcaactcgtatggcactacgtcgttcttctgctcctactgtatct
ctagataaagttatcgaaacaatgctagagactggtaaagacatgaacgcgaaataccgc
gaaacttctcaaggcggtctagcgatcaaagtgatttgctaa
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