Vibrio parahaemolyticus RIMD 2210633: VP1932
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Entry
VP1932 CDS
T00120
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpa03032
]
VP1932
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP1932
Enzymes [BR:
vpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VP1932
DNA replication proteins [BR:
vpa03032
]
Prokaryotic type
DNA Topoisomerases
VP1932
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VP1932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
ApbA
Motif
Other DBs
NCBI-ProteinID:
BAC60195
UniProt:
Q87ND6
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All DBs
Position
1:complement(2016922..2019558)
Genome browser
AA seq
878 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILAEYKEL
LEEIAELMHILASTERLMEVIREELEAVRDGFADARRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEDGERITAILPVDEFSADKFIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VEEVELPEGEEAETTEANAEQQAPEAPAEDDAEEGKEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctagactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttac
atgctggtcgatggtcaaggtaactttggctcaatcgatggcgactctgctgcggcaatg
cgttacaccgaagtacgtatggcaaaaattgcccacgaacttttggctgacctagacaaa
gaaaccgtagactacgtacctaactatgatggtacagaacagattccagcggttcttcca
accaaaattccaaacctattggtcaacggtgcttctggtatcgcggtaggtatggcaacc
aacatcccgccacataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacatccctggtccagatttcccaactgcg
gcgcttatcagcggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttcaaaagcggaaatcgaaacagagaaaaacggtaaagaaaccatcatcgtt
accgaaattccttaccaagtgaacaaagctcgtctgatcgagaagattgctgaacttgtt
aaagataagaaagttgaaggcatcagtgcgctacgtgacgaatctgacaaagatggtatg
cgtatcgttattgaatgtaagcgtgatgcagtaggcgaagtggttcttaacaacctttac
gctcaaactcagctacaaacgactttcggtatcaacatggttgcgctgaacaatggtcag
ccacagctattcaacctgaaagatatgttgaagtgctttgtggatcaccgtcgtgaagtt
gtgactcgccgtactatcttcgaattgcgtaaagctcgtgagcgtgcgcacattcttgaa
ggtcttgcacttgctctagcgaacatcgatgaaatcatcgacctaattcgcaaagcgccg
actcctgctgaagcaaaagctggtcttattgctcgtggttgggatctaggtaacgtagca
gcaatgcttgagcgtgctggtactgatgcggctcgcccagaatggctagagcctcaatac
ggtatccgcgacggtcaatacttcctgactgaacaacaagcgcaagcaattctagatcta
cgtctacataaattgaccggtctagaacacgagaagattcttgctgaatacaaagagctt
ctagaagaaatcgctgagttaatgcacattcttgcaagcactgagcgtttgatggaagtg
atccgtgaagaactagaagcagttcgtgacggatttgctgatgcacgccgtactgaaatc
acagcagctagccatgacatcgacatggaagagctgattgctcgtgaagacgtagtcgta
actctatctcacgaaggctacgttaagtaccaaatcctaagcgactacgaagcacagcgc
cgtggtggtaaaggtaagagtgcaactcgaatgaaagatgaagactacattgaacgtctt
ctagtggcgaatacccacgacaacattctatgtttctctactcgcggtaagacttaccgt
ctgaaagtttaccaattgccactagcgagccgtactgcacgtggtaaaccgatcgtgaac
atccttccattggaagatggtgagcgtatcactgcaattcttccggttgatgagttctca
gcagacaagttcatcttcatggcaactggcgacggtaccgttaagaagacttctctagac
cagtttgcgaacgtacgttcaaacggtctaattgcggtgaacctacgtgatgacgactct
ctaatcggcgttgatatcacaacgggttcaagcgacatcatgctgttctctaaagcaggt
aaagttgttcgctttagcgaggacaaagtacgtgcaatgggtcgtacagcggcaggtgtc
cgtggtatgaagctggctgacgacgaccaagtggtttcactaatcgttccgtctaacgaa
ggcgacatcctaacggttactcaaaacggttacggtaaacgtactgaattggctgaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaatggt
ccagtagttggcgcagtgcaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctggttcgtacacgtgtagcagaagttagccaagtaggccgtaacactcaaggt
gtaacactgatccgtacagcagaagacgagtcagttgttggtctacaacgtatcgatgaa
gttgaagaagtggaattgccagaaggcgaagaagcagaaacaacagaagcgaatgcagaa
cagcaagctcctgaagcgccagcagaagacgacgcggaagagggcaaagaagagtaa
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