KEGG   Vibrio parahaemolyticus RIMD 2210633: VP2036
Entry
VP2036            CDS       T00120                                 
Name
(GenBank) putative DNA polymerase III alpha chain
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpa03400]
    VP2036
Enzymes [BR:vpa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VP2036
DNA repair and recombination proteins [BR:vpa03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VP2036
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 tRNA_anti-codon PHP tRNA_anti_2 T2SSK
Other DBs
NCBI-ProteinID: BAC60299
UniProt: Q87N39
LinkDB
Position
1:2134179..2137253
AA seq 1024 aa
MSYAELFCQSNFSFLTGASHAEELVLQAAFYRYHAIAITDECSVAGVVKAHATIEQHKLD
IKQIVGSMFWLNEECQIVLLCPCRKAYAEMCRIITNARRRSEKGSYQLSEWDLMSIRHCL
VLWLPTHQASDHYWGRWLNQHHNNRLWVAIQRHLGGDDDAYTNHCEKLAHELQQPITACG
GVLMHTAERLPLQHILTAIKHGCSVDQLGFERLSNAERALRPLNKLVRIYKPEWLEESKY
IADLCEFKLSDLKYEYPTELIPNGYTPNSYLRMLVEQGKERRFPEGVPEDINQTIENELR
LIEDLKYHYYFLTIHDIVMFAKQQGILYQGRGSAANSVVCYCLEITAVDPRQISVLFERF
ISKERKEPPDIDVDFEHERREEVIQYIYKKYGRERAALAATVISYRFKSAVREVGKALGI
EETQLDFFIKNVNRRDRSQGWQAQIIELGLQPESLKGQQFIQLVNEIIGFPRHLSQHVGG
FVISSGPLYELVPVENAAMEDRTIIQWDKDDLESLELLKVDVLALGMLNAIRKCFQLIEK
HHQRSLSIAEITRRQDDPHVYRMLQKADTVGVFQIESRAQMSMLPRLKPACYYDLVIQIA
IVRPGPIQGDMVHPFLKRRNGEEPVSYPSEAVKSVLERTMGVPIFQEQVIKLAMVAAGFS
GGEADQLRRAMASWKKNGDLAKFKPKLLNGMQERGYDLAFAERIFEQICGFGEYGFPESH
SASFAVLAYCSAWLKYYYPAEFYTALLNSQPMGFYSPSQLVQDARRHGVEVLPICVNHSY
YQHHLIQRPNGRLGVQLGFRLVKGFNEEGATRLVERRPKTGYHSIQEVKQILRSRRDIEL
LASANAFQILSGNRYNARWAAMDSLSDLPLFHHIEEPSVGYQVQPSEYESLIEDYASTGL
SLNRHPITLLEEAGILPRFTRMKQLVDKEHKSLVTVAGVVTGRQSPGTAAGVTFFTLEDD
TGNINVVVWSATARAQKQAYLTSKILMVKGILEREGEVIHVIAGKLIDCTHYLSNLQSKS
RDFH
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgagttacgcagaattattttgtcagtctaatttctctttcctcactggcgcttctcat
gcagaagagcttgtgttgcaagcggctttttatcgctaccatgccatcgcgattactgac
gagtgctcggtcgctggcgtggtcaaagcccatgcaacgattgaacagcataaacttgat
atcaaacagatcgtcggcagcatgttctggctcaacgaagagtgccaaatagtcctactt
tgcccctgccgtaaagcttatgctgagatgtgccgtatcatcactaatgcaagacgacgc
agcgaaaaaggcagttatcagctttctgagtgggatctgatgtcgattcgtcactgctta
gtattgtggcttcctacccatcaagcgagtgaccattactgggggcgctggctcaatcaa
caccataacaatcgactatgggttgcgattcaacgtcatcttggtggcgacgatgatgcc
tacacaaatcactgcgagaagctagctcacgaattgcaacagcctattacagcttgtggc
ggcgtactcatgcacacggctgagcgcctgcctttacagcatatactcaccgccattaag
catggttgcagtgttgatcagctgggctttgaacgtctttctaatgctgaacgcgcatta
cgaccactgaataagttggttcgtatctacaaaccagagtggctagaggaaagtaagtac
atcgcggatttgtgcgaattcaaattgtctgatctgaaatacgaataccctacagaactg
attcctaatggctatacaccaaattcttacttacgaatgttggtggaacaaggtaaagag
cgtcgctttcctgaaggcgtgccggaggacatcaaccaaaccatcgaaaacgaactgagg
ttgatagaagacctcaagtaccattattactttttaaccattcatgacatcgtcatgttt
gctaaacagcaaggcattctttatcaaggccgaggatcagcggcgaattccgtcgtgtgt
tactgtttagaaatcaccgccgtcgatccaagacaaatctctgtcttgttcgaacgattt
atcagtaaggaacgcaaagagccaccagatatcgacgttgacttcgaacacgagcgccgt
gaagaagtcattcaatacatatataaaaaatacggacgtgaacgtgccgctcttgccgca
acagtgatcagttatcgcttcaaaagtgcggtacgtgaggtcggaaaagcgttaggtatt
gaagagacccaattggattttttcatcaaaaatgttaaccgccgagatcgtagccaaggt
tggcaagcacaaattattgagcttggtttgcaaccggaatcgctaaaaggtcagcagttt
atccaactggtgaatgagatcattggttttcctcgtcatctttctcagcatgtcggcggc
ttcgtgatttcatctggtccattgtatgaattggtgcccgttgaaaatgcagcaatggaa
gatcgaactatcattcaatgggataaggacgatctcgaaagcttagagcttctgaaagtc
gatgtattggcactcgggatgctcaatgctatccgtaaatgctttcaattaattgagaaa
caccaccagcgatcactttcaattgctgagatcactcgccgacaagatgatcctcatgtg
tatcgcatgctccaaaaagcagacaccgttggcgtttttcaaatcgaatctcgcgcgcaa
atgagcatgttgcctcgcttaaaaccagcttgttattacgacttagttattcaaatcgcg
atcgtacgcccagggccgattcaaggcgacatggttcacccgtttttgaaaaggcgcaac
ggcgaagagcctgtcagctatccatcagaagcagtgaaaagcgttttagaaagaaccatg
ggcgtgcctatattccaagaacaagtcatcaaacttgccatggtcgctgcggggtttagt
ggtggcgaggccgatcaacttcgtcgagccatggcgtcatggaaaaagaatggtgattta
gccaagtttaagcctaagctgctcaatggcatgcaagagcgaggttacgacctagcattt
gcggagcgcatttttgaacaaatttgtggctttggtgaatacggatttccagaaagtcat
tcagcgtctttcgccgttttggcgtattgctcggcatggctaaaatactactatcctgca
gagttttatacggcactgttaaacagccaaccaatggggttttacagcccttctcaattg
gtgcaagacgctcgtcgtcacggcgtcgaagttctgcctatctgtgtcaatcattcctat
taccagcatcatttgattcaacgccccaatggccgacttggtgtgcaactgggctttcga
ttggttaaaggctttaatgaggaaggcgcgactcgcttagtcgaacgacgaccaaaaacg
ggctatcactcaatacaagaggtcaaacaaatcttgagaagtcgtcgtgatatcgaatta
ttagcttctgcaaatgcctttcagatcttatcgggtaaccgttataacgcacgttgggca
gcgatggattcactgtccgatttgcctttgtttcatcatatcgaagagccaagcgttggc
tatcaagtacagccatctgaatatgaaagccttattgaagactatgccagtaccggtctt
tcgctgaaccggcatccaattaccctgctagaagaagcggggatacttcctcgctttacg
cgtatgaagcaattggttgataaagagcataaatcgcttgtgactgtggcaggtgtcgtc
accggaaggcagtccccaggcactgcagcaggcgttacatttttcaccttagaagatgac
actggcaacattaacgttgtggtatggagcgcgacggcaagagcgcaaaagcaagcttac
ctcacctcaaaaatattgatggtaaaaggtattttggaaagagagggagaagtcatccac
gtcattgcgggtaaattgattgactgtactcattatttatccaacttgcagagtaagtct
cgtgacttccattaa

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