Vibrio parahaemolyticus RIMD 2210633: VP2069
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Entry
VP2069 CDS
T00120
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00450
Selenocompound metabolism
vpa00970
Aminoacyl-tRNA biosynthesis
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VP2069
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VP2069
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpa01007
]
VP2069
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP2069
Enzymes [BR:
vpa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VP2069
Amino acid related enzymes [BR:
vpa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VP2069
Transfer RNA biogenesis [BR:
vpa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VP2069
Prokaryotic type
Other AARSs
VP2069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
BAC60332
UniProt:
Q87N07
LinkDB
All DBs
Position
1:2172058..2174088
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AA seq
676 aa
AA seq
DB search
MLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQMG
ITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ
LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD
SEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK
DKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFWPA
MLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKLNSRI
DDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVAAADR
IAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKEEGKDQELQEICSVGINLFRVL
MTYLKPVMPALAARTEAFLNQELTWEGIAQPLTGHEITKFKALFNRIDPKNIEAMIEASK
EDAAAEMAAKEKAEAAKTETELSKDPIADEIEFDTFAQVDLRIARIISCEEVPKANKLLK
FQLDIGGETRQVFSGIKSAYKPEELEGKLTVMVANLKPRKMKFGMSEGMILAAGPGGSDL
WILEPHEGAQPGMRVM
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ctgcttgtaacttgtgcccttccgtacgctaacggttcgatccaccttggccatatgctt
gagcatatccaagcggacatttgggttcgttaccaacgcctacgcggcaacactgtaaac
ttcatctgtgctgacgatgctcacggcacgccaatcatgcttaaagcgcaacagatgggt
attactccagaagagatgattgccgctgttagcgaagagcaccaaaaagacttcgctggc
tttgatatcagctttgataactaccacagcacgcactcagaagagaaccgcgaactggca
tctcacatttacctagagctaaagaaaaacggctttatctctagccgtactatctctcag
cttttcgaccctgaaaaagagatgttcctaccggatcgtttcgtaaaaggtacatgtcct
aagtgtaagtctgaagatcagtacggtgataactgtgacaactgcggcgagacttacagc
ccgacagaactgatcaatcctaaatctgcagtttctggtgcgacgccagtaatgaaagat
tctgagcacttcttctttgacctgcctcagtttgaaagcatgctaaaagagtggactcgc
tctggttctctgcaatcagaaaccgcgaacaagatgcaagagtggtttgaatctggtctg
caacaatgggatatctcgcgtgacgcaccttactttggcttcgaaatcccaggcgaaaaa
gacaagttcttctacgtatggctagatgcacctattggctacatgggctcattcaaaaac
ctatgtaacaaacgtgacgatctagacttcgatgaatactggaacaaagacagtaaaact
gaactttaccacttcatcggtaaagacatcgtgtacttccacagcttattctggcctgca
atgcttgaaggttctggcttccgtaaaccaaacaacgtgttcgtacacggctacgtaacg
gtaaacggcgcgaaaatgtctaagtcgaaaggtacattcgtgaaagcaagcacgtacctc
gatcacctagacccagaatgtctacgttactactacgcagcgaaactaaacagccgtatt
gacgatctagatcttaaccttgaagacttcactcagcgcgttaacgctgacgtagtcaac
aagatcgttaacctagcatctcgtaacgcaggcttcatcgctaaacgtttcgaaggcaaa
ctgtctgacaacttcgctgaaccagagctttacaacgaattcgtggcagctgctgaccgt
atcgcagagctttttgaagctcgcgaatttggccgtgctatccgtgaaatcacggcacta
gcagacaaagcaaaccaatacgttgacgagaaagccccttgggttgtagcgaaagaagaa
ggcaaagatcaggaactacaagaaatctgttctgtaggtatcaacctgttccgcgtacta
atgacttacttgaaaccagtaatgccagctcttgctgcacgtactgaagcattcctaaac
caagagctaacttgggaaggcattgctcagccactcactggccacgaaatcactaagttc
aaagcgctattcaaccgtatcgatccaaagaacatcgaagcgatgatcgaagcatcgaaa
gaagacgctgcagcagaaatggcagcgaaagagaaagctgaagcggctaaaacagaaact
gagctaagcaaagacccaatcgcggacgagattgagtttgatacttttgctcaagtggat
ttgcgcatcgctcgcatcatctcttgtgaagaagtgcctaaagcaaacaaactgcttaag
ttccaactggacatcggtggtgaaactcgtcaagttttctctggcatcaaatcagcctac
aaacctgaagagctagaaggcaagctaaccgtaatggtagcgaacctaaaacctcgtaag
atgaaattcggtatgtctgaaggcatgatcctagcggcaggccctggtggtagcgaccta
tggattcttgagccacacgaaggcgctcagcctggcatgcgtgtaatgtaa
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