Vibrio parahaemolyticus RIMD 2210633: VP2076
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Entry
VP2076 CDS
T00120
Name
(GenBank) putative GGDEF family protein
KO
K20955
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VP2076
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VP2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
MCP-like_PDC_1
ARCH_RTEL1
TRIQK
Motif
Other DBs
NCBI-ProteinID:
BAC60339
UniProt:
Q87N00
LinkDB
All DBs
Position
1:complement(2180836..2182296)
Genome browser
AA seq
486 aa
AA seq
DB search
MVNQRRFSLSFVVFFPLVLFIVVMLVTTKNYYDAVNRYIDTEYSRIDRALTRGIKVLTAL
DYSFTNYSNFANPLSEEHNSIVKGDICYIWPIDVLLLENVYSDGLPAVDVDYMIVGEKSL
CQAGTKINKLAEQKAGFAPSLSFLHDIESHIVGIHYIDKRGYVISSPDKYAKNFTKELWS
TLKARPFWQKTAQDKVNITLAGPGPMLDSMEGQIISLTVPIYEKGVHQGVLSIDFDVDAL
LTTSENLVGKLHLVSNFQTIPEDAVRIKPIEKERLSANHSIYYEYNLWSEIKNLTFFEKY
SIMVAVFIYVLSTVVLFYVNMHTERRYFKDLAARDPMTGLLNRRGMQAVWRNKMTKKNVA
LAVFDIDNFKTINDTYGHDVGDSAIQLVAKCIRDNIRHSDVASRFGGEEFILAIYDEDIE
GMKHILERVKKAIDERSRRVTKNGFTVSGGVVFSSASKAESFDELFKAADEKLYEAKSTG
KNKICY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggttaaccaaaggcgatttagcctctcatttgttgttttctttcctttagttctattc
attgtggtaatgctcgttactacaaaaaactactacgatgcagtcaatcgctatattgat
actgaatattcgcgtatcgatagagcgttaactcgtggtatcaaagtcttaactgcactg
gactacagctttaccaattattcaaacttcgcgaaccctctttctgaagagcataactct
attgtgaaaggcgatatctgctatatatggccgattgatgttttgctattggaaaatgtt
tacagcgatggcctgccagcggttgatgttgattacatgatcgtcggcgaaaaaagcttg
tgtcaggcagggacgaaaatcaacaaacttgcagaacaaaaagcaggctttgccccttct
ttgtccttccttcatgatattgaatcccacattgttggtatccattacatcgataaacgt
ggttatgtgatttcgtcgcccgataagtacgctaagaattttactaaagagctttggtca
acgttaaaggcgaggccattctggcaaaaaaccgcgcaagataaggtcaacattacattg
gctgggcctgggccgatgcttgattccatggaagggcaaatcatcagtttaacagtgcca
atttacgaaaaaggcgtccaccaaggggtgctctcgattgattttgatgtcgatgcgctg
ctcacgacttctgaaaaccttgtcgggaagctgcacttagtttccaatttccaaacgatt
cctgaagatgccgtgcggatcaagcccattgaaaaagagcgcttgagtgccaatcacagt
atttattacgaatataacttatggagcgagattaagaatttaacgttctttgaaaagtac
agcatcatggtcgcggtctttatttacgtattgagtaccgtagtactgttttatgtcaac
atgcacaccgaacgtcgctactttaaagatcttgctgcaagagacccaatgacagggctg
ctcaaccgcagaggaatgcaggccgtttggcgtaataaaatgacgaagaagaacgtggca
ttggctgtgttcgatatcgataactttaagactatcaatgatacttacggccatgatgta
ggtgactctgcgattcaactggtcgcgaagtgcatccgagacaacattcgtcacagtgac
gtcgcatctcgctttggtggcgaagagtttattctcgcgatatacgatgaagatattgaa
gggatgaagcacattctcgaacgagtcaaaaaagcgattgatgaacgatcacgacgagtt
acgaagaatggatttaccgtgtcgggtggtgtggtctttagctctgcaagcaaagcggaa
agctttgatgaactgttcaaggcggctgatgagaagctctatgaagcgaaaagtaccgga
aagaacaagatttgttattag
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