Vibrio parahaemolyticus RIMD 2210633: VP2179
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Entry
VP2179 CDS
T00120
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03030
DNA replication
vpa03430
Mismatch repair
vpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VP2179
03430 Mismatch repair
VP2179
03440 Homologous recombination
VP2179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpa03032
]
VP2179
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP2179
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VP2179
DNA replication proteins [BR:
vpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VP2179
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VP2179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_2
AAA_30
PIF1
AAA_18
mono-CXXC
AAA_assoc_2
DnaA_N-like_STI
UPF0181
Motif
Other DBs
NCBI-ProteinID:
BAC60442
UniProt:
Q87MQ2
LinkDB
All DBs
Position
1:complement(2288476..2290611)
Genome browser
AA seq
711 aa
AA seq
DB search
MSYLALARKWRPNKFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVGKTSIGRLFAK
GLNCETGITATPCGECATCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
DDIHQQLDYILGQEQVSAESKALGMISHAADGSMRDALSLTDQAIALGNGAVQTDIVSHM
LGTIDTDQAIHLLESISSKQPQQAMDKIHQLAANGVEWDGLLQQIATQLHRIAMYQALPA
SLDRAQPDAEKIELLSKALSPQDVQLYYQIALKGREDLTLSPNGRVGMEMIVLRMLAFRP
SANNGANIVTAGSQPQLSQMPNASLTNSAPAQQAPVAQQQSRPNPVQAQQSVSQPVRPSV
NQPASMNEEPQYQPDYQTGGYDMSPPQYDMAPPMSENPAPEAQPQQESAPAPSRMGAAGL
RHQLRSQRKQGLQQNTTQNGGTKKPKAASAKPESVIDRVAQLHGNSAQVSPNSTPKPTEP
EVEEAYRWRPSKPVETKVNTKLTPTQLKQALEHEKTPEMAQKLIDESLEQNEWAKMISLM
NLPKLVEQLALNSHYSKEGSTVSLQLRSSQAHLNTDRAQSELLNALNTVLGEECHLSIEV
GESGETPLELRDRLYQEKLQQALNSLENDPNVDFIERRFAAELDKDSVRPI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtcctaataagtttgaccaagtcgtaggg
caaaaacatgttctaacggcactggaaaacgcattggcgcaaaaccgtttacatcatgct
tacctattcagtgggacgcgtggtgtgggtaaaaccagtatcggccgtttgtttgccaaa
gggttgaactgtgagactggtatcaccgccacaccatgtggtgaatgtgctacctgccga
gagattgatgaaggtcgctttgttgacttgcttgagattgacgcggcatcacgtactaaa
gttgaagatactcgcgaactgctagacaacgttcaatacaaacccgctcgtggacgtttt
aaagtgtacctcatcgatgaggtgcacatgctgtcgcgtcactctttcaatgcgttatta
aaaaccttggaagagccgccagagtatgtgaagtttttgctcgcaacaaccgatccacag
aagctgccagttaccattttatctcgttgtctgcagttccatctcaagccaatcagtgtt
gatgatattcatcagcaacttgactacattttgggtcaagagcaggtttcagcagagtcc
aaagcgctcggtatgatctcccatgcagctgatggcagtatgcgtgatgcgctgagtttg
accgaccaagcgattgccttaggcaatggtgcggtgcaaaccgacatcgttagccacatg
ctgggaaccatcgatacggatcaagcgattcacttgcttgagtcgatcagcagtaaacaa
cctcaacaagccatggataaaatccaccaattggcggcgaatggtgttgagtgggacggt
ttattgcaacaaatcgcgacgcagttacatcgcatcgctatgtatcaagcactgcctgcg
tcactagaccgagcacagcctgatgcagaaaaaatcgaattattaagtaaagcgctcagc
ccacaagatgtgcagctttactatcaaattgcgcttaaaggtcgtgaggatctgacgctg
tctccaaatggccgtgttggtatggagatgatcgtcttacgtatgttggcttttcgtcca
tcagcgaataacggtgcaaatatcgttaccgcaggatctcaacctcagttgagtcagatg
ccaaatgcgagtctaacgaattcagcgccagcacagcaggctccggtagcacaacagcag
tcgcgcccaaatccagtgcaagcgcaacaatctgtttcgcagcccgttcgtccatcagtg
aatcagcctgcgtcaatgaatgaagagccacaatatcagccagactatcagactggtggt
tatgatatgtcgcctcctcagtacgacatggctccgccaatgagcgaaaacccagcgcca
gaggctcaacctcagcaagaaagcgcgcctgcgccatcaagaatgggagcagcaggctta
cgtcatcagttacgttcacagcgtaagcagggtttacagcaaaacacaacgcaaaatggt
ggcacaaaaaagcctaaagcggcatctgcaaaaccagaatcggtcatcgaccgagtagcg
caattgcatggcaattccgcgcaggtgtcgccaaactcaacgccaaagcctactgaacca
gaagttgaagaagcgtatcgctggcgtccaagtaagcctgttgagacgaaagttaatacc
aagctgacacctacgcagctcaagcaagcgcttgagcatgaaaaaacaccagaaatggca
caaaagctgattgatgagtcacttgaacaaaacgagtgggcgaaaatgatcagtttgatg
aacctacctaagctggtggaacaacttgcgctaaactctcactatagtaaagaaggctcg
accgtttctttacagttgagaagcagccaagcacacttaaatacagatagagctcaaagt
gagctgcttaacgcactaaacacggttttaggtgaagagtgtcacttgagtatcgaagta
ggagagagtggcgaaacaccacttgaactgagagacaggctctatcaagagaagttacaa
caagcgctgaacagcttggagaacgacccgaatgtcgactttatcgagcgtcgttttgct
gcagagcttgataaagatagtgtgcgccctatctaa
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integrated database retrieval system
