Vibrio parahaemolyticus RIMD 2210633: VP2232
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Entry
VP2232 CDS
T00120
Name
(GenBank) flagellar-specific RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02020
Two-component system
vpa02040
Flagellar assembly
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VP2232
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VP2232
09142 Cell motility
02040 Flagellar assembly
VP2232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpa03021
]
VP2232
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpa02035
]
VP2232
Transcription machinery [BR:
vpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VP2232
Bacterial motility proteins [BR:
vpa02035
]
Flagellar system
Flagellar assembly proteins
Stator
VP2232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
GerE
MarR_2
Rv2175c_wHTH
Phage_terminase
UPF0175
MarR
KORA
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
BAC60495
UniProt:
Q87MK3
LinkDB
All DBs
Position
1:complement(2345067..2345801)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKAITYDQHGKFNSQQAFIERYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLIEAQQ
NYDGSKGASFETYAGIRIRGAMLDDMRKGDWVPRSVHKNNREINQAVAELEGVLNRDPTD
SEVAAHLGMSLDQYHSALTDINCSRLVGIEDLGVSDDVISPADETDDSNPFKGVADESFR
KALVESIKQLPEREALVLSLYYDEELNLKEIGDVLGVSESRVSQILSQAMQRLRTKLSAW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgataacctatgaccagcatggcaagtttaatagtcagcaagcgttcatt
gagcgctactctgtgttggttaagcgtattgctcaccacctgttaggccgtttaccgccg
agtgttcaggtagaggatttaattcaggccggcatgatcggtcttatcgaagctcagcag
aattatgatggttctaaaggtgcgagctttgaaacttatgctggtatccgcattcgtggc
gccatgttagatgacatgcgcaaaggtgactgggtaccgcgttctgttcataagaataat
cgcgaaattaatcaagcggtcgcagagctggaaggcgtgttaaatcgtgatccgacagat
tctgaagtagcagcacatctcgggatgtcactggatcaatatcatagtgctctgaccgat
ataaactgctcaagattagttggtattgaagatttaggcgtttctgatgatgtgatttca
ccagcagatgaaactgatgacagcaacccatttaagggtgtagcagatgaatcgttcaga
aaagcactggttgaatcaataaaacagcttccagagcgtgaagctttagtactttcgctt
tattatgacgaagaactcaatttgaaagaaattggtgatgtattaggtgtaagcgaatct
cgtgtaagccaaatactaagccaagcgatgcaacgtttacgcaccaagctcagtgcgtgg
acacaaaatgactaa
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integrated database retrieval system
