Vibrio parahaemolyticus RIMD 2210633: VP2253
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Entry
VP2253 CDS
T00120
Name
(GenBank) polar flagellar protein FlaK
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02020
Two-component system
vpa02040
Flagellar assembly
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VP2253
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VP2253
09142 Cell motility
02040 Flagellar assembly
VP2253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP2253
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpa02035
]
VP2253
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Helix-turn-helix
Other families
VP2253
Bacterial motility proteins [BR:
vpa02035
]
Flagellar system
Flagellar assembly proteins
Others
VP2253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
MCM
AAA
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAC60516
UniProt:
Q87MJ6
LinkDB
All DBs
Position
1:complement(2366778..2368244)
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVIDDDASSRLNLSNILEFVGESCEAVGSEQLGDVDWSSVWSGCIVGNISAGR
AATAVMARLNDAYHIPLLVLGSFPLPVDDLPNFVGELEQPLNYPQLSEALRHCKDFLGRK
GVNVVASARKNTLFRSLVGQSRGIQEVRHLIEQVSGTEANVLILGESGTGKEVVARNIHY
HSSYRNGAFVPINCGAIPPELLESELFGHEKGAFTGALTARKGRFELADGGTIFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNSTIKVNVRVVAATHRNLESMIEEGTFREDLFYRLNV
FPIEMPALKERKQDIPLLLQELMTRLEAEGGQPICFTPRAINSLMEHHWPGNVRELANLV
ERMIILYPNSLVDVNHLPTKYRYSDIPEFQPEGNPFTSIEEQERDVFQDIFSEDFSFDEQ
SDLDHNMNAPQALPPEGVNLKELLADLEVNMISQALEAQGGVVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaagctgcttgtaattgatgatgacgcatcaagtcgtttgaattta
agcaatatattggaatttgttggagaaagttgcgaagctgtcggttctgaacagctaggc
gatgttgattggtctagcgtatggtcaggctgtatcgttggcaatatctcagcaggtcga
gcggcaactgccgtgatggctcgtctcaacgatgcataccatatcccacttcttgtcttg
ggcagctttcctttgcctgtggacgatctcccaaactttgttggcgaattagagcaaccg
ctaaattacccacagcttagtgaagcgttacgtcactgcaaagattttcttggccgtaaa
ggggtcaatgttgttgctagtgcgcgtaaaaacacgctgtttcgtagcttagtagggcag
agtcgcggtattcaagaagttcgtcatcttattgagcaagtatcgggtacagaagccaat
gtcttgatccttggtgaatcgggtacgggtaaagaagtggtagcgcgtaacattcactac
cattcgtcataccgcaatggtgcgtttgtgccaattaactgtggtgcaatcccaccggag
ctactcgaaagcgaattgtttggccacgaaaaaggcgcgtttactggtgcgttaacggcg
cgtaaaggtcgattcgaattagcagacggtggcacgatcttccttgatgaaattggcgac
atgccaatgtcgatgcaagtgaagttattgcgtgtacttcaagaacgttgttttgagcga
gttggcggaaactcgacaatcaaagtcaacgtgcgcgtggtcgctgcgacacaccgtaat
ctggaaagcatgatcgaagaaggcacgttccgtgaagatttgttctatcgtttgaacgtt
ttcccaatcgaaatgccagcgctaaaagagcgtaagcaagatatcccattgttattacaa
gagctgatgacacgtctggaagccgaaggcggccagccaatctgtttcacgccgcgtgcg
atcaactctttgatggaacaccactggccgggtaacgtgcgcgagttagctaaccttgtt
gagcgcatgatcattttgtacccaaacagtctggttgatgtgaaccatcttccgacgaaa
tatcgctacagtgatattccagagttccaacctgaaggtaatccgttcacttcgattgaa
gagcaagagcgcgatgtgtttcaagacatcttctcggaagacttcagctttgatgagcaa
agcgatctggatcacaacatgaatgcgcctcaagcgttaccaccagaaggggtgaaccta
aaagagctattagcagatttggaagtcaacatgatcagccaagcgttagaagcgcagggt
ggggtcgttgcaagagctgctgatatgctgggtatgcgccgtacaacgttggttgagaaa
atgcgcaagtataatttgcagcgttag
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