Vibrio parahaemolyticus RIMD 2210633: VP2292
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Entry
VP2292 CDS
T00120
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03030
DNA replication
vpa03430
Mismatch repair
vpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VP2292
03430 Mismatch repair
VP2292
03440 Homologous recombination
VP2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpa03032
]
VP2292
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP2292
Enzymes [BR:
vpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VP2292
DNA replication proteins [BR:
vpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VP2292
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VP2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAC60555
UniProt:
Q87MG3
LinkDB
All DBs
Position
1:complement(2402894..2403616)
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AA seq
240 aa
AA seq
DB search
MNTSSNSEHNRIVVLDTETTGMNQEGGPHYLGHRIIEIGAVEIINRKLTGRHFHVYIKPD
REIQPEAIQVHGITDEFLVDKPEYASIHQEFLDFIKGAELVAHNAPFDTGFMDYEFEKLD
PTIGKTDDYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLEFNANKQEGGVETIRRIEGRKALKVLRATADELEAHQKRLELVNDCIWHQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagcagcaattctgaacataatcgcattgtcgttctcgataccgaaaccaca
ggtatgaaccaagaaggtggtccgcactacttagggcaccgcatcatcgaaatcggtgcc
gtggagatcatcaaccgtaagctgactggtcgtcattttcatgtgtacattaagcccgat
cgtgaaattcaacctgaggcgatacaagtacacggtattaccgatgaattcttggtagat
aaaccggaatacgcgagtatccaccaagagtttcttgattttatcaaaggcgcagaactg
gttgcgcataacgcgcccttcgatactggcttcatggattatgagtttgaaaaactcgat
ccaacaattggtaaaaccgacgattactgcaaggtgacggatacgcttgccatggcgaag
aaaatcttcccgggcaagcgcaacaacctcgacgtattatgtgaacgttacggcattgat
aactcgcaccgtacactccacggggcattgctcgatgcagagattctggccgacgtttac
ctactgatgactggtgggcaaacgagtctagaatttaacgccaacaaacaagaaggcggg
gtagaaaccattcgccgtattgaaggaagaaaagcactaaaggttttgcgagcaactgcc
gatgaattagaagcgcaccagaaaagattagaactggtaaacgactgtatttggcaccaa
tag
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