Vibrio parahaemolyticus RIMD 2210633: VP2338
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Entry
VP2338 CDS
T00120
Name
(GenBank) chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00520
Amino sugar and nucleotide sugar metabolism
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
VP2338
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
VP2338
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Gene cluster
GFIT
Motif
Pfam:
Big_7
Glyco_hydro_18
CBM_5_12
TIM-barrel_EndoS
Motif
Other DBs
NCBI-ProteinID:
BAC60601
UniProt:
Q87MB8
LinkDB
All DBs
Position
1:2448556..2451102
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AA seq
848 aa
AA seq
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MKVTLLHGAVVAALSVSYQAQAYNCQSLPDWDSTATYTSGTQVKTQGAAYEAAYWTQGND
PVTNSGSWEAWKALGQCDGGNSNLSPTVSFSSPTNNAQIPEGSAITLLADASDEDGQVTQ
VEFLAGDQTVAIVAQAPFEASWTAAQGVSQLTAIATDNEGAVTSTTVAIVVQPQVELPPP
SITLTSPTGTETLSVGDNLTVTAQADDFDGIVTQVEFFVNNQSVAIDTSAPYEYQWTASV
GTYSFKAQATDDSNLSTTSQEVALVVANSETGNGGCADAVPYVAGTRYEIGALVSNLNQK
YRCDVAGWCSSDATWAYEPGEGLYWKDAWTGLGACSTPPQVTITAPTDGQVVLAGSNNEI
TANASDSDGTVTQVEFFANNDRLGVVTQAPYSVTWNATLIGANQLKAVATDNDNNTSESV
VNVNVSDKDLVISLTSPSAGQTVGLGKNLALSADATSLTSGIKQVDFMVNGAVVATDTTA
PYSANWTPAAIGQFTVSAQAVDLAGSTALSDAAAVTVVEQTEKRHKLIGYWHNFVNGAGC
PIRLADMADAWDVIDIAFAENDRNSDGTVHFNLYSGDIYSDCPALDPTQFKQDMAALQAK
GKKFVLSLGGAEGTITLNTDQDEANFVSSLTGLIAEWGFDGLDVDLESGSNLVHGSQIQA
RLGRALLQIEQNMGGDMYLTMAPEHPYVQGGYVAYSGIWGAYIPVINDTRSTLDLLHVQL
YNNGGLPNPYLPSSAPEGSVDMMVAQSKMLIEGFELADGTQFAPLRDDQVAIGLPSGPSS
ANSGQAPTQNILNALDCLTKGTSCGTVKPAFNYPNYAGVMTWSINWDQHDGFNFSKPVGD
KLTQMNAQ
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactctacttcacggagcggtggtcgctgcactcagtgttagctatcaagct
caagcctacaactgtcaaagcctgcctgattgggatagcactgcgacctacacctcaggc
actcaagtgaaaactcaaggtgccgcctatgaggccgcttattggacacaaggtaacgac
cctgtcaccaactcaggctcatgggaagcgtggaaggcattaggtcaatgcgatggcgga
aacagtaatctgtcgccaacagtgtccttctcttctccaacgaacaacgcgcaaattcct
gaaggcagcgccattactctgttagccgatgcgtccgacgaggacggacaggtcacacaa
gtggagtttttagcgggtgaccaaaccgttgctatcgtcgcccaagcgccatttgaggca
tcttggactgcagcccaaggcgtttctcaactcaccgcgattgcgacagacaatgaaggc
gcagtaacctccacaacggttgctatcgtcgttcagcctcaagtagagctgccgccacct
agcattactctcactagtccaacaggtacggaaacactgagtgtgggggataacctaacc
gtcactgctcaagctgatgactttgatggcatagttactcaagttgaattctttgttaac
aaccaatccgtcgccattgataccagtgcaccttacgaataccaatggacagcaagtgtt
ggtacgtactcatttaaagctcaagcaacagatgactctaatctctctaccacgagtcaa
gaagtggcgctggtcgtcgcgaactcagaaacaggcaatggtgggtgtgctgatgctgtc
ccttacgtagcaggcacgcgttatgaaataggagctctggtttctaaccttaaccaaaaa
tatcgttgcgacgttgcgggttggtgttcgtccgatgcaacatgggcctacgagccagga
gaaggcctgtactggaaagatgcttggactggcctaggggcgtgctcaacaccgcctcaa
gttaccattaccgccccaactgatggacaagtcgtgctcgcaggcagcaacaacgaaatc
acagccaacgcaagcgactcagatggcacggttacgcaagtggagtttttcgcgaataac
gatcgcttaggtgtcgttactcaagcgccatattccgtaacttggaacgccacacttatt
ggcgctaaccagcttaaagccgttgcaaccgataacgacaacaacacgtcagaatctgtt
gtgaacgtaaatgtcagtgataaagatttagtcatctctcttacttcgcctagcgcaggt
caaacggttggcttaggcaaaaatctcgcattaagcgccgatgcaacgtctttaacttca
ggcattaagcaagttgactttatggtcaacggcgccgttgtcgccacagatacgactgca
ccttactctgcgaactggacaccagccgcaatcggacagtttaccgtaagcgctcaagcc
gtcgatcttgccggaagcaccgcattatctgacgcggcagcggtgacagttgtagagcag
acagaaaaacgtcataaactgattggttactggcacaacttcgtgaacggtgcgggttgc
ccaatcagactggcagacatggctgacgcttgggatgtgattgatattgcctttgctgaa
aacgaccgaaacagcgatggcacagtgcacttcaacctgtattctggcgatatttacagt
gattgtcctgcactcgacccaacgcaattcaaacaagatatggctgcattgcaagcgaaa
ggtaagaagttcgttctatctcttggaggcgctgaaggcactatcactctaaacactgac
caagacgaagcgaactttgtttctagtctaactggccttatcgctgaatggggctttgat
ggtctcgatgtggatttagagagtggatctaacctagtacacggttcacaaattcaagct
cgtcttggtcgtgctttgctgcaaattgagcaaaacatggggggcgatatgtacctaacc
atggcacctgaacacccttatgttcaaggcggttacgtcgcttacagcggaatttgggga
gcgtacattccagtgatcaacgatactcgcagcacgctcgacttgcttcatgttcagcta
tacaacaacggcggtctaccaaacccgtacctaccaagttctgcaccagaaggttctgtt
gatatgatggtcgctcaatctaagatgcttatcgaaggttttgaactagccgacggcact
cagtttgcgccattgcgtgatgatcaagtcgcgatcggtttaccttcaggcccaagctcg
gcaaactcaggtcaggctccgacacaaaatattctcaacgcactagactgtttaacgaaa
ggcacatcctgtggcaccgttaaaccagcgttcaactacccgaattatgctggtgtaatg
acctggtctatcaactgggatcagcatgatggctttaacttctcaaaacctgttggtgat
aagttaactcagatgaacgcacaataa
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