Vibrio parahaemolyticus RIMD 2210633: VP2403
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Entry
VP2403 CDS
T00120
Name
(GenBank) evolved beta-D-galactosidase, alpha subunit; cryptic gene
KO
K12111
evolved beta-galactosidase subunit alpha [EC:
3.2.1.23
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00052
Galactose metabolism
vpa00511
Other glycan degradation
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VP2403
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
VP2403
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
VP2403
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
BAC60666
UniProt:
Q87M55
LinkDB
All DBs
Position
1:2520491..2523589
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AA seq
1032 aa
AA seq
DB search
MNNWENFQHLHENRMAPRAYFFSYDSVQSAQTFQRELSRRFMLLSGQWTFRYFTNPMLVP
DEFYSQTMNDWGHITVPNMWQMEGHGDLQYTDEGFPFPIDVPFVPTDNPTGAYQRTFTLG
PQWDNQQTIIKFDGVETYFEVYVNGEYVGFSKGSRLTAEFDISKFVQQGENLLSVRVMQW
ADSTYIEDQDMWWTAGIFRDVYLIGKENIHVQDLTIRTDFADDYQSATLSAQIELENLST
AIASGYTLEYALHDKGTVVASGQCDSLTIQNHHSTSFAIDMVSPTHWTAENPYLYHLFIT
LKDHQGNVVEVIPQRVGFRDIKVRDGLFYINNQYVMLHGVNRHDNDHLKGRAVGMDRVEK
DLILMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVETHGFANVGDLSRITNDPA
WEAVFVDRAVRHVHAQKNHPSIIMWSLGNESGYGCNIRAMYTATKAIDDTRLVHYEEDRD
AEVVDVISTMYSRAQLMNYFGEHPHEKPRIICEYAHAMGNGPGGLTEYQNVFYAHDHIQG
HYVWEWCDHGILARDEHGQEFYKYGGDYGDYPNNYNFCMDGLIYPDQTPAPGLKEYKQVI
APVKIRAVEGCHDRFIVENKLWFTNLDDYTITADVRAEGETLRSVQFKVEALVANSEREV
TIDLPELDEREAFVNFTVRKDSRTLYSEANHEIAVYQFQLKDNTATLPALVNNNVQPLVL
EESRLEHVITGHNFALTFSKVNGKLTSWRVNGEEIIQSEPRLNFFKPMIDNHKQEYEGLW
HPAHLQIMQEHFRTLAVEATDDSVLITTTSIIAPPVFDFGMRCTYRYQINAQGHLNVELS
GERYGDYPHVIPVIGLDLGINGSFDQVSYYGRGPEENYQDSRQANLIDVYHSTVEDMFEN
YPFPQNNGNRQHVRWASLTNRHGTGLLVKPQQEINFSAWFYTNQNLHEAQHTIELEKSGY
ITLNLDHQVMGLGSNSWGSEVLDSYRVYMDEFRYGLTLMPLQAGNCNAHVMANHDFDNAF
FTQTNTQPVNEA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaattgggaaaacttccaacacttacacgagaatcgtatggcaccgcgtgcgtac
tttttctcctacgactctgttcagagcgcacaaacctttcaacgtgaactgagtcgccgc
tttatgttgctcagcggccaatggacattccgttatttcaccaacccaatgttggtacct
gatgagttttactcacaaacaatgaacgactggggacacattaccgtcccaaacatgtgg
caaatggaaggccacggcgatctgcaatacaccgatgagggcttcccattcccgatcgac
gtcccgtttgtaccaaccgacaacccaacgggcgcttatcaacgcacatttacacttggt
ccacagtgggataaccaacaaaccatcatcaagttcgacggcgtggaaacctactttgaa
gtgtacgtaaacggcgagtacgtcggctttagcaaaggcagccgactcacagcggaattc
gacatttccaagttcgtccaacaaggcgaaaacttactctctgtacgcgtgatgcagtgg
gccgattccacttacattgaagaccaagacatgtggtggacggcggggatcttccgtgac
gtttacctaatcggaaaagagaacattcacgtccaagacctaacaattcgcaccgacttc
gccgacgattaccaaagtgcgacgctcagtgctcaaatcgaattggaaaacctttccacc
gctatcgcgtctggctatacgctggaatacgcgctgcatgacaaaggcactgtcgtagcc
agtggtcaatgcgattcactgactatccaaaaccaccactcaacaagctttgcgattgat
atggtgagcccaacacattggacggctgaaaacccttacctttaccacttgttcatcacc
ttaaaagatcaccaaggcaacgtagtggaagtgatcccacaacgcgtgggtttccgtgac
atcaaagtgcgcgatggcctgttttacatcaacaatcaatacgtgatgctgcatggtgtc
aaccgtcatgacaacgaccacctaaaaggtcgcgcagtgggcatggaccgcgtggaaaaa
gatctgattttgatgaagcaacacaacatcaactcggttcgcaccgcacactacccgaac
gacccacgcttctacgagttgtgtgatatttacggcctgtttgtgatggcagaaaccgat
gtggaaacccacggctttgccaacgttggcgacctgagccgtatcaccaatgatccagca
tgggaagcggtgtttgttgatcgcgcagtgcgccatgtgcacgcacagaaaaaccaccct
tctatcatcatgtggtcactcggtaacgaatcgggttatggctgtaacatccgtgcgatg
tataccgcgaccaaagcaattgatgacacccgtttggttcactacgaagaagaccgcgat
gctgaagtcgtcgatgtgatttcgacgatgtactcacgcgctcaactgatgaattacttt
ggcgaacacccacacgagaagccacgcatcatctgcgaatacgcacacgcgatggggaac
gggccgggtggtttaaccgaataccaaaacgtgttctatgcgcacgaccacattcaaggt
cactacgtttgggaatggtgtgatcacggcattctagcgcgtgatgaacacggtcaagag
ttctacaaatacggcggcgattacggcgactacccaaacaactacaacttctgcatggat
ggtctgatttacccagatcaaaccccggccccaggtctcaaagagtacaaacaagtcatt
gcaccggtgaaaatccgcgccgttgaaggttgccatgaccgctttatcgttgagaacaaa
ttgtggttcactaacctcgatgattacaccattactgctgacgtgcgtgccgaaggtgaa
accctgcgtagcgtgcaattcaaagtcgaagctttggtcgccaacagcgaacgtgaagtg
accatcgacttgccagaattggatgagcgcgaagcctttgtgaacttcaccgtacgcaaa
gacagtcgcacgctttacagcgaagccaaccatgaaattgcggtgtatcagttccaactg
aaagacaacaccgcgacgttgcctgcgttggtcaacaacaatgttcaacccttggtgctt
gaagaaagccgcctagagcacgtgatcacaggtcataactttgcgcttactttctccaaa
gtaaacggcaagctgacttcttggcgcgtaaatggcgaagagatcattcaatctgagccg
agactgaacttcttcaaaccgatgattgataaccacaaacaagagtatgaaggtttgtgg
cacccagcgcatctgcaaatcatgcaggagcacttccgcacacttgctgtggaagcaact
gatgattccgtcttgattacgaccaccagcatcattgcgccgccggtctttgattttggc
atgcgttgtacctatcgctatcaaatcaatgctcaaggccatttgaacgtggaactgagt
ggcgagcgctacggcgactaccctcacgtgattccggtcatcggcttggatttgggcatc
aacggcagctttgatcaagtgagttactacggtcgcggccctgaagaaaactatcaagac
agccgccaagctaacctcattgatgtttaccacagcaccgtcgaggacatgttcgagaac
tacccgttcccgcaaaacaacggcaaccgccaacacgtgcgctgggcctcactcaccaac
cgtcatggcacagggttattggtgaaacctcagcaagaaatcaacttcagcgcgtggttc
tacaccaaccaaaatctgcatgaagcgcaacatacgatcgagctagaaaagagtggctac
atcaccctcaaccttgaccatcaagtgatggggttaggctcgaactcatggggcagcgaa
gtgctcgactcttaccgcgtgtacatggacgagttccgttacggtttgacgctgatgcca
ctgcaagcaggcaattgcaacgcacacgtgatggcaaaccatgatttcgacaacgcgttt
ttcactcaaaccaatactcaaccagtcaacgaggcgtaa
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