Vibrio parahaemolyticus RIMD 2210633: VP2429
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Entry
VP2429 CDS
T00120
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VP2429
DNA repair and recombination proteins [BR:
vpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VP2429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
Lon_C
GvpD_P-loop
Rad51
AAA
SLFN-g3_helicase
ABC_tran
AAA_16
AAA_22
RecA
AAA_24
Viral_helicase1
AAA_14
NTPase_1
Zeta_toxin
AAA_29
Zn-ribbon_8
nSTAND3
Thio2_N
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BAC60692
UniProt:
Q87M29
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All DBs
Position
1:complement(2548262..2549641)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATES
KVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCTLSG
LMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcggattttccacgttgg
cagggacaatgtaatgcgtgtggtgcatggaatacgatcacagaggtgcgcattgctgct
tcgccaaccgttgctcgcaatgaacgcttaagcggttatgctggttcggcgacagaatcg
aaagtccaaaccttatctgaaatcgatctgcaagaagtgccgcgattcactagtggtttt
aaagagctcgatcgtgtgcttggtggtggtgtcgtacctggtgcggcgattctgataggt
ggtaaccctggagcgggtaagtcgacgttgcttcttcaaactatgtgtacgttatcaggg
ctgatgccgacactttacgttacgggtgaggaatcgcttcaacaggttgcgatgcgcgcg
tctcgtcttggtctgccaaaagagcacctgaagatgctatcagaaaccaacgtcgataaa
atttgccaaattgcagagaaagagcagcccagaattatggtgattgactcgattcaggtt
atgcacgtttctgatgttcaatcgtcaccgggcagtgttgctcaggtgcgagaatctgcg
acggcactgacgcgatacgcaaaacagaacaatgttgcggtatttattgttggtcacgta
acgaaagatggtactcttgccggccctaaagtccttgagcacattattgactgttctgtc
ttgcttgatggcggaacagatagtcgtttccgtacactgcgcagccacaaaaaccgtttt
ggtgcggtaaatgaattaggcgtgtttgcgatgacggggcagggactgaaagaagtaagt
aacccatcggcgattttcctttctcgtggcgaagaagagacgtcaggatcttcggtcatg
gttgtgtgggaaggtacacgtcctctattagtagagattcaagcgctggtggactactcg
caattggcaaaccctcgtcgcgtagcggttggtttggagcagaatcgtctctccttatta
ttagccgtactgcataagcacggtggtctgcaaatggccgatcaagacgtgtttgtgaat
gtagtcggcggcgttaaggtaacagaaaccagtgcggatcttgctttagtgatggcgtta
ctatcaagctttcgcgatcgtccgttgccaaaagatgtagtggtatttggcgaagttggt
ttagctggcgagattcgtccggtacctagtggccaagagcgtttgaacgaggcatttaag
cacggcttcaaaaaggcaattgtcccggcagctaatatgccaaaaggtggcattccgggg
atgcaaatccacggcgttaagaagttgtcagaggctattgaggcttttgacgagctgtaa
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